User: travis.m.couture

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30
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New User
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1 year, 9 months ago
Joined:
3 years, 2 months ago
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Posts by travis.m.couture

<prev • 6 results • page 1 of 1 • next >
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Comment: C: Scientific Names In Blast Output And Databases
... How would one get this to work -remote. I am interested in submitting my jobs directly to the NCBI servers and using their data to generate the scientific names. However, right now it only returns NA. Any suggestions? ...
written 21 months ago by travis.m.couture30
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Tool: gtManipulator (Python Package)
... Hey guys. I recently started working on gtManipulator which is a Python package designed to read, compress and manipulate .csv and .txt files containing genotyping data. The package is still in its infancy but can handle most types of NGS SNP call data. This package is extremely useful for people wh ...
tool frequencies python allele genotyping package written 2.8 years ago by travis.m.couture30
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Comment: C: Automate Illumina GenomeStudio With Python Script
... I didn't know about this. Thanks for the info! We'll give it a try. ...
written 2.8 years ago by travis.m.couture30
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Comment: C: Automate Illumina GenomeStudio With Python Script
... I called Illumina and they were no help. I am still researching this but I'm hoping someone out there can give me some direction. ...
written 3.2 years ago by travis.m.couture30
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Comment: C: Automate Illumina GenomeStudio With Python Script
... Unfortunately I'm working in a Windows environment for this project. Could the same approach for bash be taken MS-DOS? If so where would I start. If not I will have to read up on the multiprocessing module. I am familiar with he subprocess module. ...
written 3.2 years ago by travis.m.couture30
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Automate Illumina GenomeStudio With Python Script
... Hey everyone. I am currently working on automating a SNP pipeline and need some help figuring out how to interface Python with GenomeStudio. I want to be able to pass input from a python script into GenomeStudio so that the entire analysis process can be automated and manual intervention is only req ...
python automation illumina snp genomestudio written 3.2 years ago by travis.m.couture30 • updated 2.8 years ago by blrhgeruser140

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