User: rupashree.choudhury

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10 months ago
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2 years, 5 months ago
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Posts by rupashree.choudhury

<prev • 11 results • page 1 of 2 • next >
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How to know that required sequence has been extracted
... Hi I am new to python. I have a multi-fasta file containing , 21 merged fasta file of Mycosphaerella graminicola chr1-21 ,whole genome shotgun sequence.I have a python code that takes Id as input(>ENA|CM001216|CM001216.1) and extract respective sequence. My problem is, I am not sure how to ...
sequence written 11 months ago by rupashree.choudhury10 • updated 11 months ago by Macspider2.6k
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Comment: A: making a multi-fasta file out of 9 separate fasta file
... Thanks genomax and cpad0112 for your help. ...
written 11 months ago by rupashree.choudhury10
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Comment: A: making a multi-fasta file out of 9 separate fasta file
... Thanks genomax cpad0112 for your help ...
written 11 months ago by rupashree.choudhury10
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Comment: C: making a multi-fasta file out of 9 separate fasta file
... Thanks h.mon for your help ...
written 11 months ago by rupashree.choudhury10
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making a multi-fasta file out of 9 separate fasta file
... Hi I want to do a python task which involves extracting the sequence from a multi-fasta file using a file of IDs for Mycosphaerella graminicola genome. I do not have data(multi-fasta file) for this task. Therefore, I downloaded from ENA using the following link. https://www.ebi.ac.uk/ena/data/se ...
sequence written 11 months ago by rupashree.choudhury10
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Comment: C: Starting a career in Bioinformatics
... Many Thanks for the detail reply with lots of realistic approach . ...
written 2.4 years ago by rupashree.choudhury10
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Comment: C: Starting a career in Bioinformatics
... Thanks Genomax2. I appreciate the volunteering suggestion and making me aware the risk. Thanks once again. ...
written 2.5 years ago by rupashree.choudhury10
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Comment: C: Starting a career in Bioinformatics
... Thanks for your suggestion. ...
written 2.5 years ago by rupashree.choudhury10
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Comment: C: Starting a career in Bioinformatics
... Thanks Ram for noticing and mentioning it. ...
written 2.5 years ago by rupashree.choudhury10
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Comment: C: Starting a career in Bioinformatics
... Many Thanks for the detail explanation, encouragement and open-mindedness. I have experience of working on projects analysing NGS data recently. Your suggestions sound quiet helpful and practical to me. I am new to this forum I did find LLTommy's reply bit rude. But I have chosen to be open-mind ...
written 2.5 years ago by rupashree.choudhury10

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