User: muhammadzubair777
muhammadzubair777 • 10
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Posts by muhammadzubair777
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... sir how can i adjust this. i have tried alot to resolve this issue but cann't find the solution.
i am using following commands
>groups = pData(phenoData(gse28403dat[[1]]))$characteristics_ch1
>groups=as.character(groups)
>groups[groups=="disease state: Castration-resistant prostate cancer ...
written 3.9 years ago by
muhammadzubair777 • 10
0
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... anyone can help to resolve this issue.
> fit = lmFit(gse28403eset,design_gse28403)
>Error in lmFit(gse28403eset, design_gse28403) :
row dimension of design doesn't match column dimension of data object
> dim(gse28403eset)
[1] 20425 13
> dim( ...
written 3.9 years ago by
muhammadzubair777 • 10
• updated
3.9 years ago by
GenoMax ♦ 96k
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... HELLO!
I am sorting out genes from micro array data by using R. i have faced an error during running commands and stuck on it . please anyone help me to solve it.
> groups = pData(phenoData(gse17906dat[[1]]))$source_name_ch1
> groups=as.character(groups)
> groups[groups=="normal prostate ...
written 4.6 years ago by
muhammadzubair777 • 10
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... can you help me by modifying script? ...
written 4.7 years ago by
muhammadzubair777 • 10
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... ARE U SAYING LIKE THIS
>list.files("GSE30521", pattern="*.CEL")
[1] "GSM756911.CEL.gz" "GSM756912.CEL.gz" "GSM756913.CEL.gz" "GSM756914.CEL.gz" "GSM756915.CEL.gz" "GSM756916.CEL.gz" "GSM756917.CEL.gz" "GSM756918.CEL.gz"
[9] "GSM756919.CEL.gz" "GSM756920.CEL.gz" "GSM756921.CEL.gz" "GSM756922.C ...
written 4.7 years ago by
muhammadzubair777 • 10
0
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2.4k
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... hello Dear!
i am analyzing data through R and during analyzing , file read error is coming.
the using code is here. after readcell file there is an error give in box.
source("http://bioconductor.org/biocLite.R")
biocLite("huex10sttranscriptcluster.db")
biocLite("pd.huex.1.0.st.v2")
library(GEO ...
written 4.7 years ago by
muhammadzubair777 • 10
8
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3.7k
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... i am facing problem in loading data through rma in R. when i have run the command
rmaData = rma(gse28403preset)
it is giving following error!
Error in (function (classes, fdef, mtable) :
unable to find an inherited method for function ‘rma’ for signature ‘"AffyBatch"’
code is ...
written 4.7 years ago by
muhammadzubair777 • 10
• updated
2.8 years ago by
zx8754 ♦ 9.9k
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