User: shynilasanthi

gravatar for shynilasanthi
Reputation:
30
Status:
New User
Location:
Sri Lanka
Last seen:
2 weeks ago
Joined:
1 year, 2 months ago
Email:
s************@gmail.com

Posts by shynilasanthi

<prev • 8 results • page 1 of 1 • next >
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Comment: C: error in using stacks pipeline
... thanks a lot for the tip and seemed like my problem was a frequent issue in stacks. ...
written 25 days ago by shynilasanthi30
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error in using stacks pipeline
... I am using stacks pipeline for RADseq read assembly. I get this error in ustacks step *** Error in `ustacks': malloc(): memory corruption: 0x000055db58024be0 *** Can someone please tell me what would be the reason. thanks ...
assembly ngs stacks written 25 days ago by shynilasanthi30
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Comment: C: GBS and RADseq
... Thank you so much William. That was descriptive and helpful. ...
written 4 months ago by shynilasanthi30
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Comment: C: GBS and RADseq
... Thank you very much. I will refer them. I got some confusing answers when I was searching. That's why I thought to post my question here. ...
written 4 months ago by shynilasanthi30
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GBS and RADseq
... Can someone please tell me the difference between GBS and RADseq? and which one is better for SNP discovery? ...
gbs next-gen radseq sequencing written 4 months ago by shynilasanthi30 • updated 4 months ago by William3.9k
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Comment: C: Assembling sequence data generated by RADseq
... Thank you Rohit. I'll check that out ...
written 5 months ago by shynilasanthi30
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Assembling sequence data generated by RADseq
... Hi I'm working on a project where I have to assemble sequences generated by RADseq.When I was looking for a tool or pipeline I got to know about Stacks pipeline.I would like to know if there are any other tools or pipelines that I can use for assembling my data ...
assembly next-gen stack pipeline written 5 months ago by shynilasanthi30 • updated 5 months ago by h.mon8.7k
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(Closed) DNA sequencing score with gap penalty
... Hi sequences are CAAA_ _ GGTT, CACACAGGTT to calculate the score of DNA sequencing if +1 for match -1 for mismatch -3 for gap opening -1 for each position in gap. what would be the total score? ...
gap written 15 months ago by shynilasanthi30 • updated 14 months ago by Biostar ♦♦ 20

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