User: sunifeb12

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sunifeb120
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Posts by sunifeb12

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Comment: C: DEG analysis of microarray data using R (.cel file unavailable)
... So after loading the SOFT file to R using GEOquery, would I be able to proceed with the pre-processing & analysis using the simpleaffy package? Thanks for the suggestion! ...
written 14 months ago by sunifeb120
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DEG analysis of microarray data using R (.cel file unavailable)
... I would like to do a differential gene expression analysis on a microarray data using the simpleaffy package in R. I was following this particular [tutorial][1] for doing the analysis, as I am a newbie in this field. Unfortunately, for a particular dataset used for my study, .cel file is not availa ...
R microarray differential gene expression analysis written 14 months ago by sunifeb120 • updated 14 months ago by h.mon26k
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Is there any software/tool that can be used to identify/count the number of feed forward loops and feedback loops in the gene regulatory networks?
... Hi all Is there any bioinformatics software/tool that can be used to identify/ count the number of Feed Forward loops [FFLs] and Feedback loops [FBLs] in a biological network, say for example, a gene regulatory network? Thanks ...
systems biology biological networks written 22 months ago by sunifeb120 • updated 22 months ago by Asaf5.9k
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Comment: C: GO analysis: DAVID vs GREAT vs GOrilla
... It seems the *Ontologies* tab in the *Enrichr* is not recently updated, as it gives the output with 2015 at the end of each categories, whereas the *Transcription* and *Pathways* tabs giving the output with 2016. Anyone have an idea on this? ...
written 2.4 years ago by sunifeb120
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Comment: C: GO analysis: DAVID vs GREAT vs GOrilla
... It seems the *Ontologies* tab in the *Enrichr* is not recently updated, as it gives the output with 2015 at the end of each categories, whereas the *Transcription* and *Pathways* tabs giving the output with 2016. Anyone have any idea on this? ...
written 2.4 years ago by sunifeb120

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