Moderator: Malachi Griffith

Reputation:
17,170
Status:
Trusted
Location:
Washington University School of Medicine, St. Louis, USA
Website:
http://www.malachigrif...
Scholar ID:
Google Scholar Page
Last seen:
3 months ago
Joined:
7 years, 7 months ago
Email:
m*******@genome.wustl.edu

I am an Assistant Director of the Genome Institute, and Assistant Professor of Genetics at Washington University School of Medicine. I am conducting research in medical genomics and bioinformatics specializing in the application of molecular biology, informatics, and statistics to the study of cancer.

Posts by Malachi Griffith

<prev • 481 results • page 1 of 49 • next >
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Job: Cancer Genomics and Bioinformatics positions at WashU (Griffith Lab)
... We are looking to fill some bioinformatics staff positions. Join a fantastic team (~20 bioinformaticians) working on exciting areas of cancer, genomics, immunotherapy, precision medicine. Our lab is located within the McDonnell Genome Institute at Washington University School of Medicine. We hav ...
immunogenomics bioinformatics job cancer written 6 months ago by Malachi Griffith17k • updated 6 months ago by Chris Miller20k
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News: Workshop for genomic data visualization and interpretation
... We will be delivering a workshop on **advanced R and bioinformatics applications for visualization and interpretation of genomic data**. While the course has advanced modules, we try to start from basic principles and build from there. Many of the genomic data interpretation and visualization prin ...
R news ggplot2 rna-seq genomics written 6 months ago by Malachi Griffith17k
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Comment: C: Comprehensive & integrated drug/target database?
... This post discusses these databases extensively: https://www.biostars.org/p/17392/#17396 ...
written 15 months ago by Malachi Griffith17k
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Comment: C: Exploring cancer mutation data portals
... Other options that are in the vein of DoCM: [Cancer Hotspots][1] Other options that are in the vein of CIViC: Jackson Lab's [JAX CKB][2] MSKCC's [ONCOKB][3] Cornell's [PMKB][4] IRB's [CGI][5] If you would like learn more about efforts to harmonize the efforts of the cancer variant interpretation r ...
written 17 months ago by Malachi Griffith17k
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Comment: C: Exploring cancer mutation data portals
... The reason these portals exist is that in part it is still an open research question which mutations are definitively drivers versus passengers. That being said, for your needs you might want to approach this problem from the perspective of more established tumor suppressors and oncogenes. Here is ...
written 17 months ago by Malachi Griffith17k
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Comment: C: Liftover Of Na12878 Coordinates Into Hg19 Coordinates
... Detailed post on tools for converting genome coordinates between builds: https://www.biostars.org/p/65558/ ...
written 21 months ago by Malachi Griffith17k
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Comment: C: Updating dbSNP rs ids from old SNP data
... Detailed post on tools for converting coordinates between genome builds: https://www.biostars.org/p/65558/ ...
written 21 months ago by Malachi Griffith17k
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Comment: C: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover,
... I have updated the example, but it should be noted that the majority of these tools generically support all major builds for multiple species (not just human). When a new build comes out, the "chain" files that explain how to convert to/from that build are usually released soon after. ...
written 21 months ago by Malachi Griffith17k
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Comment: C: Conversion Between Hg18 And Hg19
... This post describes various tools for coordinate conversions: https://www.biostars.org/p/65558/ ...
written 21 months ago by Malachi Griffith17k
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Comment: C: How Do You Manage Moving Existing Projects To A New Genome Build?
... This post details various options for coordinate conversions between builds: https://www.biostars.org/p/65558/ ...
written 21 months ago by Malachi Griffith17k

Latest awards to Malachi Griffith

Epic Question 6 months ago, created a question with more than 10,000 views. For List Of Genome Sequencing Centers/Institutes
Appreciated 6 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Great Question 7 months ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Appreciated 7 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Teacher 8 months ago, created an answer with at least 3 up-votes. For A: How Does Argonaute Recognize Mirnas?
Scholar 11 months ago, created an answer that has been accepted. For A: Finding Mutation Hotspot At Level Of Amino Acid By Spatial Proximity In Protein
Good Answer 11 months ago, created an answer that was upvoted at least 5 times. For A: How Does Argonaute Recognize Mirnas?
Appreciated 11 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Great Question 15 months ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Teacher 16 months ago, created an answer with at least 3 up-votes. For A: How Does Argonaute Recognize Mirnas?
Popular Question 16 months ago, created a question with more than 1,000 views. For Analysis of dbGaP data on the cloud
Good Answer 16 months ago, created an answer that was upvoted at least 5 times. For A: How Does Argonaute Recognize Mirnas?
Appreciated 16 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Appreciated 16 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Great Question 17 months ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Popular Question 17 months ago, created a question with more than 1,000 views. For Analysis of dbGaP data on the cloud
Gold Standard 20 months ago, created a post with more than 25 bookmarks. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Great Question 21 months ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Appreciated 23 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Appreciated 23 months ago, created a post with more than 5 votes. For A: Technical Or Biological Replicate
Appreciated 2.1 years ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Great Question 2.1 years ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Good Answer 2.1 years ago, created an answer that was upvoted at least 5 times. For A: How Does Argonaute Recognize Mirnas?
Popular Question 2.1 years ago, created a question with more than 1,000 views. For Analysis of dbGaP data on the cloud
Appreciated 2.3 years ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?

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