Moderator: Malachi Griffith

Reputation:
15,740
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Trusted
Location:
Washington University School of Medicine, St. Louis, USA
Website:
http://www.malachigrif...
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Google Scholar Page
Last seen:
1 month, 2 weeks ago
Joined:
6 years, 1 month ago
Email:
m*******@genome.wustl.edu

I am an Assistant Director of the Genome Institute, and Assistant Professor of Genetics at Washington University School of Medicine. I am conducting research in medical genomics and bioinformatics specializing in the application of molecular biology, informatics, and statistics to the study of cancer.

Posts by Malachi Griffith

<prev • 476 results • page 1 of 48 • next >
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Comment: C: Liftover Of Na12878 Coordinates Into Hg19 Coordinates
... Detailed post on tools for converting genome coordinates between builds: https://www.biostars.org/p/65558/ ...
written 3 months ago by Malachi Griffith16k
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Comment: C: Updating dbSNP rs ids from old SNP data
... Detailed post on tools for converting coordinates between genome builds: https://www.biostars.org/p/65558/ ...
written 3 months ago by Malachi Griffith16k
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Comment: C: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover,
... I have updated the example, but it should be noted that the majority of these tools generically support all major builds for multiple species (not just human). When a new build comes out, the "chain" files that explain how to convert to/from that build are usually released soon after. ...
written 3 months ago by Malachi Griffith16k
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Comment: C: Conversion Between Hg18 And Hg19
... This post describes various tools for coordinate conversions: https://www.biostars.org/p/65558/ ...
written 3 months ago by Malachi Griffith16k
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Comment: C: How Do You Manage Moving Existing Projects To A New Genome Build?
... This post details various options for coordinate conversions between builds: https://www.biostars.org/p/65558/ ...
written 3 months ago by Malachi Griffith16k
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Comment: C: Visualizing genomic data: techniques and challenges. Our interview with Dr. Mala
... Cross-link to the post with more details on the content of this course: https://www.biostars.org/p/240625/ ...
written 4 months ago by Malachi Griffith16k
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Comment: C: Workshop: Genomic Data Visualization and Interpretation (Berlin, Germany)
... Cross linking to the interview post related to this course for convenience: https://www.biostars.org/p/259960/ ...
written 4 months ago by Malachi Griffith16k
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Comment: C: Exploring cancer mutation data portals
... You are most welcome. I just updated this post to include the Genomic Data Commons. This is a great resource for accessing the raw data, variant call files, etc. ...
written 7 months ago by Malachi Griffith16k
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Comment: C: Database Of Tumor Suppressors And/Or Oncogenes
... The 404 points you at this old paper version: http://nar.oxfordjournals.org/content/35/suppl_1/D721.full ...
written 11 months ago by Malachi Griffith16k
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Comment: C: What are the resources to design the most comprehensive clinical SNP chip?
... The bioRXiv for the [CIViC][1] paper lists several other useful resources that you may find helpful (mostly cancer focused): http://biorxiv.org/content/early/2016/09/01/072892 [1]: https://civic.genome.wustl.edu/#/home ...
written 15 months ago by Malachi Griffith16k

Latest awards to Malachi Griffith

Great Question 12 weeks ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Appreciated 4 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Appreciated 4 months ago, created a post with more than 5 votes. For A: Technical Or Biological Replicate
Appreciated 7 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Great Question 7 months ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Good Answer 7 months ago, created an answer that was upvoted at least 5 times. For A: How Does Argonaute Recognize Mirnas?
Popular Question 7 months ago, created a question with more than 1,000 views. For Analysis of dbGaP data on the cloud
Appreciated 9 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Popular Question 9 months ago, created a question with more than 1,000 views. For Bioinformatics Scientist At Compendia Bioscience, Ann Arbor, Mi
Teacher 9 months ago, created an answer with at least 3 up-votes. For A: How Does Argonaute Recognize Mirnas?
Popular Question 10 months ago, created a question with more than 1,000 views. For Bioinformatics Scientist At Compendia Bioscience, Ann Arbor, Mi
Teacher 10 months ago, created an answer with at least 3 up-votes. For A: How Does Argonaute Recognize Mirnas?
Great Question 11 months ago, created a question with more than 5,000 views. For List Of Genome Sequencing Centers/Institutes
Good Answer 11 months ago, created an answer that was upvoted at least 5 times. For A: How Does Argonaute Recognize Mirnas?
Popular Question 11 months ago, created a question with more than 1,000 views. For Bioinformatics Scientist At Compendia Bioscience, Ann Arbor, Mi
Commentator 11 months ago, created a comment with at least 3 up-votes. For C: Ways To Filter Noise From Rnaseq Data
Gold Standard 12 months ago, created a post with more than 25 bookmarks. For A: Recommended Tools For Alternative Splicing Detection From Rna-Seq Data
Good Answer 12 months ago, created an answer that was upvoted at least 5 times. For A: How Does Argonaute Recognize Mirnas?
Appreciated 14 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Appreciated 14 months ago, created a post with more than 5 votes. For A: Technical Or Biological Replicate
Great Question 14 months ago, created a question with more than 5,000 views. For List Of Genome Sequencing Centers/Institutes
Commentator 14 months ago, created a comment with at least 3 up-votes. For C: Ways To Filter Noise From Rnaseq Data
Teacher 14 months ago, created an answer with at least 3 up-votes. For A: How Does Argonaute Recognize Mirnas?
Popular Question 15 months ago, created a question with more than 1,000 views. For Bioinformatics Scientist At Compendia Bioscience, Ann Arbor, Mi
Gold Standard 16 months ago, created a post with more than 25 bookmarks. For Current Topics in Genome Analysis 2014 (collection of educational lectures)

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