Moderator: Malachi Griffith

Reputation:
16,380
Status:
Trusted
Location:
Washington University School of Medicine, St. Louis, USA
Website:
http://www.malachigrif...
Scholar ID:
Google Scholar Page
Last seen:
5 days, 15 hours ago
Joined:
6 years, 9 months ago
Email:
m*******@genome.wustl.edu

I am an Assistant Director of the Genome Institute, and Assistant Professor of Genetics at Washington University School of Medicine. I am conducting research in medical genomics and bioinformatics specializing in the application of molecular biology, informatics, and statistics to the study of cancer.

Posts by Malachi Griffith

<prev • 479 results • page 1 of 48 • next >
1
vote
1
answer
272
views
1
answers
Comment: C: Comprehensive & integrated drug/target database?
... This post discusses these databases extensively: https://www.biostars.org/p/17392/#17396 ...
written 5 months ago by Malachi Griffith16k
2
votes
1
answer
7.1k
views
1
answers
Comment: C: Exploring cancer mutation data portals
... Other options that are in the vein of DoCM: [Cancer Hotspots][1] Other options that are in the vein of CIViC: Jackson Lab's [JAX CKB][2] MSKCC's [ONCOKB][3] Cornell's [PMKB][4] IRB's [CGI][5] If you would like learn more about efforts to harmonize the efforts of the cancer variant interpretation r ...
written 6 months ago by Malachi Griffith16k
1
vote
1
answer
7.1k
views
1
answers
Comment: C: Exploring cancer mutation data portals
... The reason these portals exist is that in part it is still an open research question which mutations are definitively drivers versus passengers. That being said, for your needs you might want to approach this problem from the perspective of more established tumor suppressors and oncogenes. Here is ...
written 7 months ago by Malachi Griffith16k
0
votes
1
answer
2.0k
views
1
answers
Comment: C: Liftover Of Na12878 Coordinates Into Hg19 Coordinates
... Detailed post on tools for converting genome coordinates between builds: https://www.biostars.org/p/65558/ ...
written 11 months ago by Malachi Griffith16k
0
votes
3
answers
2.3k
views
3
answers
Comment: C: Updating dbSNP rs ids from old SNP data
... Detailed post on tools for converting coordinates between genome builds: https://www.biostars.org/p/65558/ ...
written 11 months ago by Malachi Griffith16k
0
votes
3
answers
68k
views
3
answers
Comment: C: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover,
... I have updated the example, but it should be noted that the majority of these tools generically support all major builds for multiple species (not just human). When a new build comes out, the "chain" files that explain how to convert to/from that build are usually released soon after. ...
written 11 months ago by Malachi Griffith16k
0
votes
2
answers
16k
views
2
answers
Comment: C: Conversion Between Hg18 And Hg19
... This post describes various tools for coordinate conversions: https://www.biostars.org/p/65558/ ...
written 11 months ago by Malachi Griffith16k
0
votes
3
answers
3.7k
views
3
answers
Comment: C: How Do You Manage Moving Existing Projects To A New Genome Build?
... This post details various options for coordinate conversions between builds: https://www.biostars.org/p/65558/ ...
written 11 months ago by Malachi Griffith16k
0
votes
1
answer
1.2k
views
1
answers
Comment: C: Visualizing genomic data: techniques and challenges. Our interview with Dr. Mala
... Cross-link to the post with more details on the content of this course: https://www.biostars.org/p/240625/ ...
written 12 months ago by Malachi Griffith16k
0
votes
2
answers
1.4k
views
2
answers
Comment: C: Workshop: Genomic Data Visualization and Interpretation (Berlin, Germany)
... Cross linking to the interview post related to this course for convenience: https://www.biostars.org/p/259960/ ...
written 12 months ago by Malachi Griffith16k

Latest awards to Malachi Griffith

Good Answer 5 weeks ago, created an answer that was upvoted at least 5 times. For A: How Does Argonaute Recognize Mirnas?
Appreciated 5 weeks ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Great Question 5 months ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Teacher 6 months ago, created an answer with at least 3 up-votes. For A: How Does Argonaute Recognize Mirnas?
Popular Question 6 months ago, created a question with more than 1,000 views. For Analysis of dbGaP data on the cloud
Good Answer 6 months ago, created an answer that was upvoted at least 5 times. For A: How Does Argonaute Recognize Mirnas?
Appreciated 6 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Appreciated 6 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Great Question 6 months ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Popular Question 7 months ago, created a question with more than 1,000 views. For Analysis of dbGaP data on the cloud
Gold Standard 9 months ago, created a post with more than 25 bookmarks. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Great Question 11 months ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Appreciated 12 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Appreciated 12 months ago, created a post with more than 5 votes. For A: Technical Or Biological Replicate
Appreciated 15 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Great Question 15 months ago, created a question with more than 5,000 views. For Current Topics in Genome Analysis 2014 (collection of educational lectures)
Good Answer 15 months ago, created an answer that was upvoted at least 5 times. For A: How Does Argonaute Recognize Mirnas?
Popular Question 15 months ago, created a question with more than 1,000 views. For Analysis of dbGaP data on the cloud
Appreciated 17 months ago, created a post with more than 5 votes. For A: How Does Argonaute Recognize Mirnas?
Popular Question 18 months ago, created a question with more than 1,000 views. For Bioinformatics Scientist At Compendia Bioscience, Ann Arbor, Mi
Teacher 18 months ago, created an answer with at least 3 up-votes. For A: How Does Argonaute Recognize Mirnas?
Popular Question 19 months ago, created a question with more than 1,000 views. For Bioinformatics Scientist At Compendia Bioscience, Ann Arbor, Mi
Teacher 19 months ago, created an answer with at least 3 up-votes. For A: How Does Argonaute Recognize Mirnas?
Great Question 19 months ago, created a question with more than 5,000 views. For List Of Genome Sequencing Centers/Institutes

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1739 users visited in the last hour