User: Abdul Rawoof

gravatar for Abdul Rawoof
Abdul Rawoof60
Reputation:
60
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Trusted
Location:
United States
Last seen:
1 month ago
Joined:
7 years, 8 months ago
Email:
a**********@gmail.com

Posts by Abdul Rawoof

<prev • 17 results • page 1 of 2 • next >
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Answer: A: Error in cummeRbund R library package (Error: Columns index not found)
... Update cummeRbund package to version 2.26.0 Hope, this will resolve your error issue. ...
written 4 weeks ago by Abdul Rawoof60
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Comment: C: How to extract Gene symbol from protein fasta file header?
... Dear skalayout, what i did is that, first of all i extracted all fasta header in a separated text file using a small perl script. You will get protein fasta header like following >IPI:IPI00000875.1|SWISSPROT:P01141|TREMBL:Q5U081|ENSEMBL:ENSP00000357648|REFSEQ:NP_002255|VEGA:OTTHUMP00000012879 ...
written 4.6 years ago by Abdul Rawoof60
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Network visualization from a matrix (filled with 0 &1 values only) using R/bioconductor.
... Hello everyone, I have a matrix based on binary concept as follows,   T1 T2 T3 Gene1 0 1 1 Gene2 1 0 1 .. 0 0 0 .. 0 1 0 Gene nth 0 0 1   I want to make a network using this matr ...
gene R network bioconductor packages written 5.0 years ago by Abdul Rawoof60 • updated 5.0 years ago by mikhail.shugay3.3k
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Comment: C: How to extract Gene symbol from protein fasta file header?
... Hey hi...this is a great help for me...I was also trying to do like that but failed..and I did it with excel easily... Thanks, ...
written 5.0 years ago by Abdul Rawoof60
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Comment: C: How to extract Gene symbol from protein fasta file header?
... Thanks Ashutosh...your suggession are helpful for me..but I have did this with excel also..and I got it easily...Thanks again... ...
written 5.0 years ago by Abdul Rawoof60
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Comment: C: How to extract Gene symbol from protein fasta file header?
... Thanks for you suggestion dear..but I have multiple different Tax_ID for each entry. Then what should I do for that. ...
written 5.0 years ago by Abdul Rawoof60
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How to extract Gene symbol from protein fasta file header?
... Hello, I have multiple fasta headers in a file and I want to extract only Gene_Symbol from the all headers in a separate file. >IPI:IPI00000875.1|SWISSPROT:P01141|TREMBL:Q5U081|ENSEMBL:ENSP00000357648|REFSEQ:NP_002255|VEGA:OTTHUMP00000012879 Tax_Id=9806 Gene_Symbol=NOTCH Kinase NotchRas Expec ...
gene name fasta perl written 5.0 years ago by Abdul Rawoof60 • updated 2.5 years ago by skalayout0
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Micro-Rna Target Finding Using Miranda Tool
... Hello everyone... Could anyone tell me how can check whether the output which I got using miRanDa tool to find miRNA targets is correct or not..?? And other is how can I check whether it is working on user defined parameter or not..?? ...
bioinformatics tool target written 5.8 years ago by Abdul Rawoof60 • updated 2.9 years ago by deepshikhamore0
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Comment: C: Promoter Sequence Search
... Thanks dear for your response... I found using EMBL..your information was really very informative for me.. ...
written 5.8 years ago by Abdul Rawoof60
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Promoter Sequence Search
... Hello everyone, Could anyone tell me how can I search a promoter sequence (with it's start and end position) in a given gene Sequence. Thanks in advance... ...
gene ncbi sequence promoter written 5.8 years ago by Abdul Rawoof60 • updated 5.8 years ago by Niek De Klein2.5k

Latest awards to Abdul Rawoof

Great Question 2.3 years ago, created a question with more than 5,000 views. For Promoter Sequence Search
Popular Question 2.3 years ago, created a question with more than 1,000 views. For Microarray Data Analysis Project
Popular Question 4.5 years ago, created a question with more than 1,000 views. For Microarray Data Analysis Project
Popular Question 4.5 years ago, created a question with more than 1,000 views. For Extraction Of Certain Lines Which Starts And Ends With A Particular Description.
Popular Question 4.5 years ago, created a question with more than 1,000 views. For Micro-Rna Target Finding Using Miranda Tool
Popular Question 4.5 years ago, created a question with more than 1,000 views. For Promoter Sequence Search
Popular Question 4.5 years ago, created a question with more than 1,000 views. For How To Extract Only Geneid From Fasta Header?
Popular Question 4.5 years ago, created a question with more than 1,000 views. For How to extract Gene symbol from protein fasta file header?

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