User: a.rex

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a.rex90
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Posts by a.rex

<prev • 51 results • page 1 of 6 • next >
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Comment: C: How do I go from UniProt ID to retrieving the gene name?
... Thank you - I am however aware of this. I just wanted to know if there was a way of inputting a very large list >1000 loci. Something terminal based? ...
written 29 days ago by a.rex90
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How do I go from UniProt ID to retrieving the gene name?
... I have a very long list of gene and their corresponding uniprot IDs from a blast against the uniprot database. I was wondering - is there a tool I can download to convert these ids to a gene name. Thank you ...
sequence written 29 days ago by a.rex90
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Comment: C: How do I access statistics for read counts after demultiplexing in bcl2fastq?
... Sorry - my bad, I had to download the entire subset of html files to view the index.html as it made links to other I files (I presume). ...
written 4 months ago by a.rex90
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Comment: C: How do I access statistics for read counts after demultiplexing in bcl2fastq?
... Thanks for this - I located the index.html but it is empty. However, the demultiplexed read fastqs have been made and are populated with reads.... ...
written 4 months ago by a.rex90
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Comment: C: Issues installing bcl2fastq?
... Thank you - I managed to download the deb. ...
written 4 months ago by a.rex90
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How do I access statistics for read counts after demultiplexing in bcl2fastq?
... I have recently done some demultiplexing in bcl2fastq - however, how can I get data to tell me how many reads were sorted for each index? On basespace a graphical result is given for the total number of reads that passed a qc30. Is there a similar analysis in bcl2fastq? ...
bcl2fastq written 4 months ago by a.rex90 • updated 4 months ago by genomax39k
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Comment: C: Issues installing bcl2fastq?
... I downloaded the deb for 1.8.4. 2.17 is only available as an rpm file....I think. ...
written 4 months ago by a.rex90
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Comment: C: Issues installing bcl2fastq?
... Unfortunately I need the v2 version for a next-seq. When I convert to deb with alien, I get the following error which I cannot diagnose. dpkg-deb: error: parsing file 'debian/bcl2fastq2/DEBIAN/control' near line 2 package 'bcl2fastq2': error in Version string 'v2.17.1.14-2': version number does not ...
written 4 months ago by a.rex90
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Comment: C: Issues installing bcl2fastq?
... Thanks for this, I downloaded the deb, and used sudo dpkg -i bcl2fastq_1.8.4-2_amd64-2.deb. Where does it install to? ...
written 4 months ago by a.rex90
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Comment: C: Issues installing bcl2fastq?
... Hi, I tried using rpm. However, if I follow the illumina installation guide I also get an error when using the command: rpm --install bcl2fastq2-v2.18.0.12-Linux-x86_64.rpm. It says: rpm: RPM should not be used directly install RPM packages, use Alien instead! rpm: However assuming you know what yo ...
written 4 months ago by a.rex90

Latest awards to a.rex

Supporter 9 months ago, voted at least 25 times.
Student 11 months ago, asked a question with at least 3 up-votes. For mapping reads to repetitive elements in genome?

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