User: Ramon Vidal

gravatar for Ramon Vidal
Ramon Vidal10
Reputation:
10
Status:
New User
Location:
UdeM
Last seen:
5 years, 12 months ago
Joined:
7 years, 5 months ago
Email:
r**********@gmail.com

Bioinformatician at Sainte-Justine Hospital/University of Montreal. Genome Transcriptomics RNA-seq Chip-seq Sanger, Illumina, 454, SOLiD

Posts by Ramon Vidal

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Answer: A: How To Extract Highly Connected Subgraphs From A Gene Network Representation
... Have you tryed genemania plugin for cytoscape? After create the interactome with your genes you can use mcode plugin to identify subnetworks. ...
written 6.0 years ago by Ramon Vidal10
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Bioscope With Cufflinks
... Does any one here have ever used Bioscope with Cufflinks to do DE analysis? I am trying to use the BAM files generated by Bioscope to do it but all my output files have zero expression values (fpkm 0.0). I am using the recommended parameter "--library-type fr-secondstrand" and I also tried to conve ...
cufflinks written 7.5 years ago by Ramon Vidal10 • updated 4.1 years ago by Biostar ♦♦ 20

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