User: sameedmsiddiqui

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Posts by sameedmsiddiqui

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Comment: C: Determining Paired-end or Mate-pair insert length in De Novo Sequencing
... Hi, Thanks! I'll make sure to check it out. Regards. ...
written 4.5 years ago by sameedmsiddiqui0
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Comment: C: Determining Paired-end or Mate-pair insert length in De Novo Sequencing
... Hi. Thanks a bunch. So in response to (1), I wonder how paired-ends can be useful to align to repetitive regions in the reference genome, for example when one end of the pair is in a non-repetitive region and the other is in the repetitive region? On one hand, it seems that precision in aligning wit ...
written 4.5 years ago by sameedmsiddiqui0
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Determining Paired-end or Mate-pair insert length in De Novo Sequencing
... Hello, I have a few questions regarding mate-pair and paired end sequences: 1. Does one have to know the *exact* length of the insert for the paired end or mate-pair sequences to be useful? (I'm not sure if "insert length" is the proper term to use in mate-pairs, but it seems to be the same conce ...
de novo paired end mate pair written 4.5 years ago by sameedmsiddiqui0 • updated 4.5 years ago by Charles Plessy2.7k

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