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Posts by jjoh090
... Is it safe to assume that a sequence assigned to a particular COG ID in an old version of eggNOG is related to sequences assigned to that same COG ID in the latest version? In more detail, I would like to fund the ‘COG functional category’ for some eggNOG COG IDs retrieved from UniProtKB (e.g. www ...
... I am wondering why the same protein sequence can appear in multiple orthologous groups _within the same taxonomic level_ in eggNOG? I have been looking at the orthologous groups (OG) provided for archaea (arNOG) in eggNOG v4.5. When parsing the archaea members file (arNOG.members.tsv.gz), I notice ...
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