User: jjoh090

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jjoh0900
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Posts by jjoh090

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Are COG IDs consistent across different versions of the eggNOG database?
... Is it safe to assume that a sequence assigned to a particular COG ID in an old version of eggNOG is related to sequences assigned to that same COG ID in the latest version? In more detail, I would like to fund the ‘COG functional category’ for some eggNOG COG IDs retrieved from UniProtKB (e.g. www ...
eggnog embl written 24 months ago by jjoh0900 • updated 22 months ago by Biostar ♦♦ 20
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Can a protein sequence be assigned to multiple orthologous groups in eggNOG?
... I am wondering why the same protein sequence can appear in multiple orthologous groups _within the same taxonomic level_ in eggNOG? I have been looking at the orthologous groups (OG) provided for archaea (arNOG) in eggNOG v4.5. When parsing the archaea members file (arNOG.members.tsv.gz), I notice ...
eggnog written 24 months ago by jjoh0900

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