User: mcc

gravatar for mcc
mcc80
Reputation:
80
Status:
Trusted
Location:
PVD, USA
Twitter:
@oaxacamatt1
Last seen:
22 hours ago
Joined:
6 years ago
Email:
m*************@gmail.com

New to Bioinformatics, R, Python, NGS, machine learning, Biopython, cloud, AWS, 

Posts by mcc

<prev • 28 results • page 1 of 3 • next >
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Answer: A: Junior bioinformatician (Bsc or Msc) - Dana Farber Cancer Institute, Boston, MA,
... Dear rubendries, I would like to apply. However since I JUST saw this notice, 'Has this position been filled yet?' ...
written 9 weeks ago by mcc80
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Answer: A: How to find a random set of proteins which are not in your target set?
... UniProt Random Sequence Picker http://www.rocrooks.co.uk/biology/uniprot-random.php ...
written 3 months ago by mcc80
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Comment: C: How to find a random set of proteins which are not in your target set?
... Hi jrj, Yes i tried that early on and it did not work. However, Searching around Biostars I found (https://www.biostars.org/p/106254/) which I had seen before... ...
written 3 months ago by mcc80
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How to find a random set of proteins which are not in your target set?
... I am seeking a way to download a random set of >600 proteins from NCBI (for example) that are NOT my target protein set. For example, I have a list of fasta files which are hemoglobin, myoglobin (all available species) and want to find fasta files that do NOT contain these proteins. I am seekin ...
ncbi protein search random null set written 3 months ago by mcc80 • updated 3 months ago by Bioaln230
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Answer: A: The Biostar Handbook. A bioinformatics e-book for beginners.
... Has Biostar now become a sales and advertising platform for 'for-profit' books and guides? Is Biostar the proper forum for a book, that by the sound of it, is based on the free content that is found without charge in this educational platform. Although, I applaud the efforts of the writers and e ...
written 10 months ago by mcc80
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Answer: A: Introduction to bedtools.
... The tutorial and puzzle links for Bedtools can be now be found at: http://quinlanlab.org/tutorials/bedtools/bedtools.html ...
written 11 months ago by mcc80
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Answer: A: mfold energies difference
... One thing that occurred to me is this paper by Nick Pace, > Hydrogen Bonding Stabilizes Globular Proteins Biophysical Journal Volume 71 October 1996 2033-2039 States: >Measurements of the change in conformational stability, delta (delta G), for the mutation of a hydrogen bonded residue to o ...
written 13 months ago by mcc80
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Comment: C: PhD programs in bioinformatics and genomics
... That does not answer my question. Did you do the analysis? Did you do the analysis in R or Python? Can you make that code available? ...
written 13 months ago by mcc80
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Comment: C: PhD programs in bioinformatics and genomics
... Where did you get this information? ...
written 13 months ago by mcc80
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Comment: C: InsideDNA: 5 Unix commands every bioinformatician should know
... Dear Sir or Madam, I think this tutorial needs a great deal of work. There are many issues I would like to address but have decided not to spend too much of my own time. The one comment I will make is regarding the formatting of this text, which makes it very difficult for me to glean any useful in ...
written 15 months ago by mcc80

Latest awards to mcc

Scholar 3 months ago, created an answer that has been accepted. For A: How to find a random set of proteins which are not in your target set?
Teacher 3 months ago, created an answer with at least 3 up-votes. For A: How to find a random set of proteins which are not in your target set?
Popular Question 7 months ago, created a question with more than 1,000 views. For How to find all the Somatic Mutations in a Chromosome
Voter 14 months ago, voted more than 100 times.
Autobiographer 15 months ago, has more than 80 characters in the information field of the user's profile.
Popular Question 17 months ago, created a question with more than 1,000 views. For Partial Protein Sequence
Supporter 4.6 years ago, voted at least 25 times.

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