User: Leite

gravatar for Leite
Leite100
Reputation:
100
Status:
Trusted
Location:
Scholar ID:
Google Scholar Page
Last seen:
13 minutes ago
Joined:
1 year, 2 months ago
Email:
g*******@gmail.com

Posts by Leite

<prev • 51 results • page 1 of 6 • next >
0
votes
2
answers
94
views
2
answers
Answer: A: Pathway Annotation for variants Exome Data
... You can try [http://amp.pharm.mssm.edu/Enrichr/][1] [1]: http://amp.pharm.mssm.edu/Enrichr/ ...
written 6 hours ago by Leite100
0
votes
4
answers
159
views
4
answers
Answer: A: free software or tools for analyzing mass spectrometry
... Hey, In my opinion, [MaxQuant][1] is the best and most used, it is quantitative proteomics software package designed for analyzing large-scale mass-spectrometric data sets. Best regards, Leite [1]: http://www.coxdocs.org/doku.php?id=maxquant:common:download_and_installation#download_and_inst ...
written 2 days ago by Leite100
0
votes
5
answers
256
views
5
answers
Answer: A: Gene ontology and KEGG pathway analysis of rice RNA-seq data
... You can use [Uniprot][1], In this example I used Amborella trichopoda genes upload pictures Best regards, Leite [1]: http://www.uniprot.org/uploadlists/ ...
written 2 days ago by Leite100
0
votes
1
answer
290
views
1
answers
Comment: C: "Studying R" Why don't I find the same results of the articles?
... Hey Kevin, I sent to you a email, I dont know if you has received it. ...
written 18 days ago by Leite100
0
votes
1
answer
290
views
1
answers
Comment: C: "Studying R" Why don't I find the same results of the articles?
... Dear Kevin, Thank you very much, your help was of great importance for my studies. ...
written 19 days ago by Leite100
0
votes
1
answer
290
views
1
answers
Comment: C: "Studying R" Why don't I find the same results of the articles?
... If I understood correctly, there is no correct and fixed way of doing analysis of genetic expression, each researcher does the way he thinks is correct. ...
written 19 days ago by Leite100
0
votes
1
answer
290
views
1
answers
Comment: C: "Studying R" Why don't I find the same results of the articles?
... Hey Kevin, >Can you confirm that you also have 54674 probes? No, dont have 54674, only 54612 probes. >Where do you summarise your probe values by the mean in order to get expression values over genes? It looks like this is missing from my code, How can I add this? How can I add t.test () ...
written 19 days ago by Leite100
0
votes
1
answer
290
views
1
answers
Comment: C: "Studying R" Why don't I find the same results of the articles?
... Hey Kevin, Thank you for your attention, *For the study by Li:* > 2.2 Data preprocessing and DEGs screening > >The raw data were preprocessed by utilizing affy package in R (available at http://www.bioconductor.org/packages/release/bioc/html/affy.html) (Gautier et al., 2004). Briefly, t ...
written 19 days ago by Leite100
0
votes
1
answer
290
views
1
answers
Comment: C: "Studying R" Why don't I find the same results of the articles?
... OK sorry for this, Can you delete the message ? ...
written 19 days ago by Leite100
0
votes
1
answer
290
views
1
answers
Comment: C: "Studying R" Why don't I find the same results of the articles?
... Hey Kevin Blighe, Thank you very much for your reply, What worries me about the different results found is exactly the lack of reproducibility, because each one will use a specific code in the R with specific packages which are often not mentioned in the methods. Between the example I quote the t ...
written 19 days ago by Leite100

Latest awards to Leite

Scholar 11 weeks ago, created an answer that has been accepted. For A: military application of bioinformatics
Teacher 11 weeks ago, created an answer with at least 3 up-votes. For A: military application of bioinformatics
Supporter 11 weeks ago, voted at least 25 times.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 698 users visited in the last hour