User: martinguerrerog89

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Posts by martinguerrerog89

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Comment: C: Protocol To Downlad TCGA Data From GDC
... Hi! I had the same UUIDs to TCGA ID problem. I solved it using R to write a JSON sentence that is the used in the command line [Here i wrote a post about it][1] Hope it is usefull! [1]: https://www.biostars.org/p/215175/ ...
written 12 weeks ago by martinguerrerog8990
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Tutorial: TCGA UUIDS to TCGA barcode (SampleID) in R
... For those not familiar with the command line and with the JSON query language, here is a fairly simple way to map UUIDS to TCGA barcode ID using R and a canned command in the terminal **The first part is in R** *1) Extract the files ID from your manifest file (the one you get from the GDC after yo ...
R tutorial next-gen gdc tcga written 3 months ago by martinguerrerog8990 • updated 5 weeks ago by Chunjie Liu90

Latest awards to martinguerrerog89

Appreciated 12 weeks ago, created a post with more than 5 votes. For TCGA UUIDS to Sample ID in R

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