User: jin

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jin80
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Posts by jin

<prev • 15 results • page 1 of 2 • next >
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Answer: A: Download gene list associated with GO terms from DAVID
... For Plant GO annotation and enrichment analysis, try [PlantRegMap][1]. [1]: http://planttfdb.cbi.pku.edu.cn/help_go.php ...
written 23 months ago by jin80
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Answer: A: Transcription Factor Binding Sites, Motifs, Profiles and Targets from ~10200 ChI
... For plant binding motifs, binding sites, regulation, as well as binding site prediction and functional enrichment analyses, try [PlantRegMap][1]. [1]: http://plantregmap.cbi.pku.edu.cn/ ...
written 23 months ago by jin80
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Answer: A: GO term enrichment
... You can try [PlantRegMap][1], which integrated GO annotation for 132 plant species and perform enrichment analysis. [1]: http://plantregmap.cbi.pku.edu.cn/go.php ...
written 2.1 years ago by jin80
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Answer: A: Tools To Find Gene Ontology Term Enrichment
... For plants, you can try [PlantRegMap][1], which integrated GO annotation for 132 plant species and perform enrichment analysis. [1]: http://plantregmap.cbi.pku.edu.cn/go.php ...
written 2.1 years ago by jin80
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Answer: A: Gene Ontology Tool Selection
... If you are working on plants, try [PlantRegMap][1] which annotated GO annotation for all genes from 165 plant species then do enrichment analysis. [1]: http://plantregmap.cbi.pku.edu.cn/go.php ...
written 2.1 years ago by jin80
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Answer: A: Finding the TFs that regulate a set of genes
... You can retrieve the regulation among these genes at [PlantRegMap][1] for 132 plant species, which also provides a [Tool][2] to find enriched TFs in the gene set. [1]: http://plantregmap.cbi.pku.edu.cn/network.php [2]: http://plantregmap.cbi.pku.edu.cn/regulation_prediction.php ...
written 2.1 years ago by jin80
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Answer: A: Over-Represented Transcription Factor Binding Sites
... [PlantRegMap][1] provides a tool to find the enriched TFs in provided sequenced for plants. [1]: http://plantregmap.cbi.pku.edu.cn/regulation_prediction.php ...
written 2.1 years ago by jin80
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Answer: A: Linking Transcription Factors To Gene Promoters
... For plants, you can try [PlantRegMap][1], which predicts TF binding sites based on sets of manually curated, non-redundant, high-quality TF binding motifs derived from experiments. [1]: http://plantregmap.cbi.pku.edu.cn/binding_site_prediction.php ...
written 2.1 years ago by jin80
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Answer: A: Best Database Of Transcription Factor Binding Sites
... You can access the TF binding sites in Plants at [PlantRegMap][1], which are derived from ChIP-seq and DNase I genomic footprinting. [1]: http://plantregmap.cbi.pku.edu.cn/ ...
written 2.1 years ago by jin80
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Answer: A: Transcription Factor Enrichment From Transcriptome
... For plants, you can try [PlantRegMap][1] to find the enriched transcription factors in a set of genes. [1]: http://plantregmap.cbi.pku.edu.cn/regulation_prediction.php ...
written 2.1 years ago by jin80

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