User: ahramkim1128

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ahramkim112810
Reputation:
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New User
Location:
United States
Last seen:
6 months, 1 week ago
Joined:
2 years, 3 months ago
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a***********@gmail.com

Posts by ahramkim1128

<prev • 5 results • page 1 of 1 • next >
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Comment: C: The Biostar Handbook. A bioinformatics e-book for beginners.
... The outpuf of ls -l ~/bin/wonderdump is -rwxrwxrwx 1 AR AR 1057 Jan 5 11:15 /home/AR/bin/wonderdump Is there anything wrong? ...
written 2.1 years ago by ahramkim112810
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Comment: C: The Biostar Handbook. A bioinformatics e-book for beginners.
... wonderdump doesn't work. I did 1. curl http://data.biostarhandbook.com/scripts/wonderdump.sh > ~/bin/wonderdump 2. chmod +x ~/bin/wonderdump 3. wonderdump SRR1972739 -X 10000 --split-files and I saw "wonderdump: no command for wonderdump." In addition, there is no content about installing ...
written 2.1 years ago by ahramkim112810
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Answer: A: The Biostar Handbook. A bioinformatics e-book for beginners.
... In https://read.biostarhandbook.com/ontology/sequence-ontology.html page, URL=https://raw.githubusercontent.com/The-Sequence-Ontology/SO-Ontologies/master/so-xp-simple.obo curl $URL > so.obo doesn't work. There is no file in the URL. Please edit this in the next update version. :) ...
written 2.1 years ago by ahramkim112810
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Comment: C: Bigwig to bed conversion on Windows OS without command line
... There is a wig/bedgraph to bigwig, but bigwig to wig/bed. Could you inform the link (bigwig to wig)? ...
written 2.3 years ago by ahramkim112810
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Bigwig to bed conversion on Windows OS without command line
... Hi, I am a fly geneticist and have no experience about programming language. I saw several papers using ChIP-seq analysis and wanted to check whether some transcription factors bind to locus of my interest gene. I downloaded seq data and tried to analyze it using EaSeq on Windows OS. Unfortun ...
bigwigtobed windows chip-seq easeq written 2.3 years ago by ahramkim112810

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