User: goh

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goh10
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Posts by goh

<prev • 17 results • page 1 of 2 • next >
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Comment: C: Split excel column into different files
... Its a task i have to do it repeatedly on many different files. I have posted the example above. I dont mind to convert the excel file into other types of file to get the job done, and then convert back to excel. ...
written 10 weeks ago by goh10
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Comment: C: Split excel column into different files
... Hi, Thanks. will try it out. The example is [here][1]. column B and E is my parameters. column K until R is my data which i would like to separate it into individual files. Thanks! [1]: https://drive.google.com/file/d/1gQVvR7PEdqigAaY8cXb9U8m_ydyk0ich/view?usp=sharing ...
written 10 weeks ago by goh10
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Split excel column into different files
... Hi, I have been trying to use multiple command i can find online to spilt the columns into different files but couldnt. I have an 10 columns excel file ( first 2 col is paramaters, the remaining 8 col is the data). I would like to split it into 8 separate files which all 8 contains first 2 col par ...
excel written 10 weeks ago by goh10
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Comment: C: Install Lefse in Ubuntu 12
... Hi i tried two command:- sudo pip install https://bitbucket.org/nsegata/lefse/get/default.zip sudo -H pip install https://bitbucket.org/nsegata/lefse/get/default.zip Both failed with error msg, Could not install packages due to an environment error Than i downloaded the zip file an u ...
written 3 months ago by goh10
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Comment: C: Install Lefse in Ubuntu 12
... Hi, pip install --upgrade pip resulted some error as below. Btw, im now using ubuntu 14. luc@luc-VirtualBox:~$ pip install --upgrade pip Downloading/unpacking pip from https://files.pythonhosted.org/packages/0f/74/ecd13431bcc456ed390b44c8a6e917c1820365cbebcb6a8974d1cd045ab4/pip-10.0.1-py2.p ...
written 3 months ago by goh10 • updated 3 months ago by genomax55k
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Comment: C: Install Lefse in Ubuntu 12
... Hi, Do you mean the Ubuntu setup from the begining? Regards, Goh ...
written 3 months ago by goh10
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Comment: C: Install Lefse in Ubuntu 12
... Hi, Because I read some where that LEfSe scripts require python2, and rpy2 to communicate with R, but the newest releases of rpy2 no longer support python2 - only python3. As I'm very new in this, so I choose the earliest Ubuntu version. Because I think python version comes with the Ubuntu instal ...
written 3 months ago by goh10
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Comment: C: Install Lefse in Ubuntu 12
... i have successfully installed pip and matplotlib using the command as below. sudo apt-get python-pip sudo apt-get python-matplotlib When i execute the command below i have these errors sudo pip install https://bitbucket.org/nsegata/lefse/get/default.zip Downloading/unpacking htt ...
written 3 months ago by goh10 • updated 3 months ago by genomax55k
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Install Lefse in Ubuntu 12
... Hi all, I'm new to bioinformatics and command/ scripts. I have been trying to install lefse in ubuntu 12 which i build in virtualbox, but unsuccessful. I have found and followed one instructions as below. https://bitbucket.org/nsegata/metaphlan/wiki/MetaPhlAn_Pipelines_Tutorial However, still c ...
microbiome lefse install written 3 months ago by goh10
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Comment: C: How to split fastq file contains two different header information
... it works nicely. Thank you. ...
written 4 months ago by goh10

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