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4
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0
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1.3k
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Answer: A: Does anyone know what exactly 1/2 mean?
6.4 years ago by Matteo Schiavinato ★ 3.6k
2
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1
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2.2k
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Answer: A: How Hisat Works
6.4 years ago by Matteo Schiavinato ★ 3.6k
1
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0
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1.3k
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Answer: A: How to know that required sequence has been extracted
6.4 years ago by Matteo Schiavinato ★ 3.6k
2
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1
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3.3k
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Answer: A: Are there maximum gap penalty scores in BWA-MEM?
6.4 years ago by Matteo Schiavinato ★ 3.6k
0
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2
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2.9k
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Answer: A: receive GC-content profile for a given window-size and splitting multi fasta fil
6.4 years ago by Matteo Schiavinato ★ 3.6k
1
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0
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2.9k
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Answer: A: denovo assembly of unmapped reads
6.5 years ago by Matteo Schiavinato ★ 3.6k
2
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1
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5.5k
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Answer: A: Which package to use for RPKM/FPKM RNA-seq counts?
6.6 years ago by Matteo Schiavinato ★ 3.6k
1
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4
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13k
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Answer: A: Technical replicates in RNAseq
6.6 years ago by Matteo Schiavinato ★ 3.6k
0
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1
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1.8k
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Answer: A: standalone BLAST parametes
6.6 years ago by Matteo Schiavinato ★ 3.6k
4
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1
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2.2k
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Answer: A: Tophat multiple or unique mapping criteria
6.6 years ago by Matteo Schiavinato ★ 3.6k
3
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1
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7.9k
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Answer: A: hisat2 parameters for paired end and single end reads from same samples
6.6 years ago by Matteo Schiavinato ★ 3.6k
1
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0
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3.3k
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Answer: A: Rename the fasta entries in Unix or R
6.6 years ago by Matteo Schiavinato ★ 3.6k
0
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0
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1.4k
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Answer: A: awesome cancer genomics
6.6 years ago by Matteo Schiavinato ★ 3.6k
1
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1
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2.6k
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Answer: A: Locate short DNA sequence from fasta file
6.7 years ago by Matteo Schiavinato ★ 3.6k
0
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0
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2.0k
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Answer: A: BAM Index Chunks
6.7 years ago by Matteo Schiavinato ★ 3.6k
0
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1
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5.4k
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Answer: A: Python Regular Expressions to extract the transcript ID from lines of GTF file
6.7 years ago by Matteo Schiavinato ★ 3.6k
0
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1
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2.9k
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Answer: A: How to count reads mapped to multiple loci?
6.7 years ago by Matteo Schiavinato ★ 3.6k
0
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0
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1.6k
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Answer: A: To screen for a good aligner
6.7 years ago by Matteo Schiavinato ★ 3.6k
0
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1
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3.6k
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Answer: A: calculate RPKM from read count and gff by galaxy
6.7 years ago by Matteo Schiavinato ★ 3.6k
2
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0
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1.4k
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Answer: A: Extracting string from every other line
6.8 years ago by Matteo Schiavinato ★ 3.6k
1
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1
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11k
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Answer: A: Augustus gene prediction for non model organism
6.8 years ago by Matteo Schiavinato ★ 3.6k
0
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0
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14k
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Answer: A: bowtie2-align died with signal 6 (ABRT) (core dumped)
7.0 years ago by Matteo Schiavinato ★ 3.6k
3
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1
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4.9k
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Answer: A: Using samtools to find mutation
7.0 years ago by Matteo Schiavinato ★ 3.6k
3
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0
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4.8k
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Answer: A: bcftools merge is not merging ??
7.0 years ago by Matteo Schiavinato ★ 3.6k
6
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1
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6.9k
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Answer: A: mismatch setting in bowtie2
7.0 years ago by Matteo Schiavinato ★ 3.6k
1
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1
reply
2.0k
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Answer: A: "Spikey" RNA-Seq coverage
7.0 years ago by Matteo Schiavinato ★ 3.6k
2
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0
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6.7k
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Answer: A: Speed up Picard MarkDuplicates or any better software?
7.0 years ago by Matteo Schiavinato ★ 3.6k
1
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0
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2.5k
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Answer: A: Variant calling from multiple sequencing runs for a single samples
7.0 years ago by Matteo Schiavinato ★ 3.6k
0
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0
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1.6k
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Answer: A: genome features and sequence parsing
7.0 years ago by Matteo Schiavinato ★ 3.6k
1
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1
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1.5k
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Answer: A: Fasta to gff with custom set of genes
7.0 years ago by Matteo Schiavinato ★ 3.6k
3
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0
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6.0k
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Answer: A: How can I only took the mapped ones from STAR ?
7.0 years ago by Matteo Schiavinato ★ 3.6k
1
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0
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4.0k
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Answer: C: trimming reads in fastq file
7.0 years ago by Matteo Schiavinato ★ 3.6k
3
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1
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35k
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Answer: C: how to select with unix a column by the column name in a txt files
7.0 years ago by Matteo Schiavinato ★ 3.6k
3
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1
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2.1k
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Answer: A: Error in raw count file of .sam after alignment on GRCh38
7.0 years ago by Matteo Schiavinato ★ 3.6k
1
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1
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4.0k
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Answer: A: Error running gffcompare
7.0 years ago by Matteo Schiavinato ★ 3.6k
3
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1
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1.5k
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Answer: C: Arranging header in nr database via Python (Unable to input multiple files)
7.0 years ago by Matteo Schiavinato ★ 3.6k
0
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0
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1.6k
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Answer: A: Extract fasta sequences from main list using a list of titles
7.1 years ago by Matteo Schiavinato ★ 3.6k
0
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1
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2.1k
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Answer: C: Can anybody explain what this statement says we should not distinguish between a
7.1 years ago by Matteo Schiavinato ★ 3.6k
2
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1
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1.8k
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Answer: A: read.table function loss of columns in bed file
7.1 years ago by Matteo Schiavinato ★ 3.6k
2
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0
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2.7k
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Answer: A: deciding --max-depth for RNAseq variant calling
7.1 years ago by Matteo Schiavinato ★ 3.6k
0
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0
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2.9k
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Answer: A: best way to interpret RNA-seq after counts and differential expression results?
7.1 years ago by Matteo Schiavinato ★ 3.6k
1
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2
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2.6k
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Answer: A: Extract SNPs within 5 bps distance apart
7.1 years ago by Matteo Schiavinato ★ 3.6k
3
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1
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2.8k
views
Answer: A: What are the compositional differences between Prokaryotes' gene/genome and Euka
7.1 years ago by Matteo Schiavinato ★ 3.6k
1
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0
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1.3k
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Answer: A: large deletion detection in a haploid microbial eukaryote
7.1 years ago by Matteo Schiavinato ★ 3.6k
2
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1
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2.1k
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Answer: A: What does benchmark method exactly mean?
7.2 years ago by Matteo Schiavinato ★ 3.6k
3
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1
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2.9k
views
Answer: A: VCF to binary files
7.2 years ago by Matteo Schiavinato ★ 3.6k
0
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1
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1.2k
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Answer: A: Analysis over single chromosome data
7.3 years ago by Matteo Schiavinato ★ 3.6k
1
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0
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1.4k
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Answer: A: Are there any tools which display SNPs inside each gene?
7.3 years ago by Matteo Schiavinato ★ 3.6k
1
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1
reply
2.5k
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Answer: A: How to exercise RPKM cut-off
7.3 years ago by Matteo Schiavinato ★ 3.6k
0
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0
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1.8k
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Answer: A: orthologue mapping using circos
7.3 years ago by Matteo Schiavinato ★ 3.6k
125 results • Page 2 of 3
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