User: gpng

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gpng0
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Posts by gpng

<prev • 4 results • page 1 of 1 • next >
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Help exploring unknown region
... Hi! I am currently doing a project that involves calling copy number variants, and then running a GWAS with several quantitative traits. I've found a particular deletion that seems to be associated with neutrophil levels, but a check on ensembl shows there are no genes in the region - only lncRNA, ...
gene ensembl forum databases function prediction written 2.1 years ago by gpng0 • updated 2.1 years ago by Emily_Ensembl20k
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Ensembl REST API structural variants
... Hi, I am trying to extract the structural variants for a list of regions using the ensembl rest API, e.g. /overlap/region/human/7:140424943-140624564?feature=structural_variation;content-type=application/json I was hoping to get results from the 'SV - 1KG 3 - All' track as seen in the browser, b ...
ensembl api written 2.2 years ago by gpng0 • updated 2.2 years ago by Emily_Ensembl20k
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Comment: C: Weird phylogenetic tree (bacterial transporters)
... Hi! Thanks for the reply. This is the unrooted tree. ...
written 3.3 years ago by gpng0
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Weird phylogenetic tree (bacterial transporters)
... ![enter image description here][1] [1]: http://i68.tinypic.com/2vukf9d.png "phyml tree" Hi, I am trying to do some phylogenetic analysis on a family of bacterial transporters, but keep getting this strange tree with one group that is basically the root (i.e. the branch length is almost 0)(see ...
phylogeny alignment bacteria tree transporters written 3.3 years ago by gpng0

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Popular Question 2.0 years ago, created a question with more than 1,000 views. For Weird phylogenetic tree (bacterial transporters)

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