User: wangzer

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wangzer0
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Posts by wangzer

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Comment: C: How to quantify the DNA methylation level of a gene from WGBS data?
... thanks,I will try again. ...
written 6 months ago by wangzer0
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How to quantify the DNA methylation level of a gene from WGBS data?
... I have got the WGBS data and the methylation the ratio of the all sites. But I want to know the every genes' methylation level. How to quantify the DNA methylation level of a gene from WGBS data? Finally, I want plot a fig. like this. What tools can I use to implement it?![enter image description h ...
R quantify tool dna methylation written 6 months ago by wangzer0 • updated 6 months ago by Devon Ryan90k
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How to get metthylKit(or SMART2) input file ?
... I use Bismark to align and methylation_extractor, then i get the result file--*.deduplicated.sorted.sam And how do I get the metthylKit(or SMART2) input file like this: ##chrBase chr base strand coverage freqC freqT chr21.9764539 chr21 9764539 R 12 25.00 75.00 chr21.9764513 chr21 9764513 R 12 0.00 ...
dna methylation dmr bismark methylkit written 19 months ago by wangzer0

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