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Comment: Comment: Right way to call purecn with cnvkit?
2.4 years ago by markus.riester ▴ 550
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Comment: Comment: Right way to call purecn with cnvkit?
2.4 years ago by markus.riester ▴ 550
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Comment: Comment: tumor fraction estimation for ctDNA panel sequecing data
2.5 years ago by markus.riester ▴ 550
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Comment: Comment: Relation between copy number log ratio and copy number
2.9 years ago by markus.riester ▴ 550
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3.7k
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Comment: Comment: Relation between copy number log ratio and copy number
2.9 years ago by markus.riester ▴ 550
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3.7k
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Comment: Comment: Relation between copy number log ratio and copy number
2.9 years ago by markus.riester ▴ 550
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Comment: C: PureCN mappingbiasfile and minimum number of NormalDB samples question
3.8 years ago by markus.riester ▴ 550
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Comment: C: purecn with cnvkit
3.8 years ago by markus.riester ▴ 550
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3.7k
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Comment: C: purecn with cnvkit
3.8 years ago by markus.riester ▴ 550
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3.7k
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Comment: C: purecn with cnvkit
3.8 years ago by markus.riester ▴ 550
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Comment: C: PureCN prepare environment error
4.1 years ago by markus.riester ▴ 550
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1.6k
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Comment: A: TCGA CNV data reformatting
4.1 years ago by markus.riester ▴ 550
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1.3k
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Comment: C: PureCN Coverage.R error
4.2 years ago by markus.riester ▴ 550
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1.3k
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Comment: C: PureCN Coverage.R error
4.2 years ago by markus.riester ▴ 550
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2.7k
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Comment: C: PureCN prepare environment error
4.2 years ago by markus.riester ▴ 550
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2.7k
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Comment: C: PureCN prepare environment error
4.2 years ago by markus.riester ▴ 550
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Comment: C: Filtering for individual allelic balance in multisample vcf using GATK4
4.9 years ago by markus.riester ▴ 550
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2.8k
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Comment: C: Filtering for individual allelic balance in multisample vcf using GATK4
4.9 years ago by markus.riester ▴ 550
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2.8k
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Comment: C: Filtering for individual allelic balance in multisample vcf using GATK4
4.9 years ago by markus.riester ▴ 550
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1.8k
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Comment: A: Library size normalization during CNV calling from genomically doubled tumor tis
5.1 years ago by markus.riester ▴ 550
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Comment: C: Library size normalization during CNV calling from genomically doubled tumor tis
5.1 years ago by markus.riester ▴ 550
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1.8k
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Comment: C: Library size normalization during CNV calling from genomically doubled tumor tis
5.1 years ago by markus.riester ▴ 550
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Comment: C: How to use result of CNVkit to estimate purity by PureCN
5.1 years ago by markus.riester ▴ 550
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Comment: C: How to use result of CNVkit to estimate purity by PureCN
5.3 years ago by markus.riester ▴ 550
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3.0k
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Comment: C: How to use result of CNVkit to estimate purity by PureCN
5.3 years ago by markus.riester ▴ 550
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4.1k
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Comment: C: Ploidy Correction In NGS cancer data (human)
5.3 years ago by markus.riester ▴ 550
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Comment: C: Ploidy Correction In NGS cancer data (human)
5.3 years ago by markus.riester ▴ 550
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4.1k
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Comment: C: Ploidy Correction In NGS cancer data (human)
5.3 years ago by markus.riester ▴ 550
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Comment: C: Passing cnvkit output to pureCN to account for cellularity
5.3 years ago by markus.riester ▴ 550
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Comment: C: Adding IDT CNV Backbone Spike-in to Small Targeted Panel for CNV Calling With CN
5.3 years ago by markus.riester ▴ 550
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Comment: C: PureCN: Estimating tumor purity and ploidy
5.5 years ago by markus.riester ▴ 550
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1.4k
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Comment: C: PureCN: Estimating tumor purity and ploidy
5.5 years ago by markus.riester ▴ 550
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1.7k
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Comment: C: PureCN: Tool for estimation of tumor purity and ploidy
5.5 years ago by markus.riester ▴ 550
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Comment: C: TMB Tumor Mutation Burden
6.6 years ago by markus.riester ▴ 550
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3.5k
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Comment: C: Infer somatic mutations without normal control
6.6 years ago by markus.riester ▴ 550
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3.2k
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Comment: C: Tumor purity estimation by allele frequency of COSMIC identified somatic mutatio
7.0 years ago by markus.riester ▴ 550
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1
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7.3k
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Comment: C: tumor only variant calling tools
7.0 years ago by markus.riester ▴ 550
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7.3k
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Comment: C: tumor only variant calling tools
7.0 years ago by markus.riester ▴ 550
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1
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2.7k
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Comment: C: WES or WGS analysis of cancer samples with no matched germline
7.2 years ago by markus.riester ▴ 550
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1.3k
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Comment: C: Detecting CNV can't cover aneuploidy situation
7.2 years ago by markus.riester ▴ 550
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3.4k
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Comment: C: "Shifted" copy number ratios coming from cnvkit?
7.2 years ago by markus.riester ▴ 550
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1.6k
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Comment: C: SNP Array data with 0 copies for a segment
7.5 years ago by markus.riester ▴ 550
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Comment: C: The ABSOLUTE input and HAPSEG output format
7.5 years ago by markus.riester ▴ 550
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3.3k
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Comment: C: General recommendations for cancer genomics studies
7.7 years ago by markus.riester ▴ 550
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