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Posts by jule
... Thank you! Before, I downloaded the SRA from the GEO database and converted them with fastq-dump from the sra-toolkit. But when I tried to split it into two paired fastq files it didnt work out and other tools I used to check if it is paired or not pretended to be single-end. So, I am very grateful ...
... Hi, I am struggeling with the alignment quality of my mapped ChIP-seq data. This topic in general has been discussed before, however only for paired-end and my data is single-end. I used public ChIP-seq data from GEO (GSE55062) for H3K27ac, IgG and some others (single-end). In the corresponding pa ...
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