User: celine

gravatar for celine
celine0
Reputation:
0
Status:
New User
Last seen:
9 months ago
Joined:
1 year, 1 month ago
Email:
c*********@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by celine

<prev • 4 results • page 1 of 1 • next >
0
votes
1
answer
484
views
1
answers
Comment: C: troubleshooting: error on run of kissplice2refgenome
... Some more information: My .psl file was generated with BLAT (I couldn't get the other options to work) My annotations was downloaded from http://genome.ucsc.edu/cgi-bin/hgTables (http://bit.ly/2iDUiFB) ...
written 12 months ago by celine0
0
votes
3
answers
437
views
3
answers
Answer: A: how to signify experiments/replica files in kissplice
... Hi Vincent, Just to be sure I understand completely... is kissplice parsing the order of the inputs or the names of the files? If the later, is it looking specifically for the c's and r's, or does it look for matches? (e.g. I could put exp1rep1, exp1rep2...) Thanks for your help! ...
written 13 months ago by celine0
0
votes
1
answer
484
views
1
answer
troubleshooting: error on run of kissplice2refgenome
... I'm following a modified version of the pipeline outlined at http://kissplice.prabi.fr/tools/kiss2rt/ Except, that I have a reference genome. Thus, I'm using kissplice2refgenome (and also I skip the trinity/transdecoder steps). I've generated my .psl file through blat, and downloaded the annotati ...
kissplice2refgenome snp written 13 months ago by celine0 • updated 12 months ago by leandro.ishi.lima30
1
vote
3
answers
437
views
3
answers
how to signify experiments/replica files in kissplice
... I'm trying to follow the pipeline outlined at http://kissplice.prabi.fr/tools/kiss2rt/ I'm not quite certain how to signify different experiments / different replicas when using kissplice. For example, in trinity, this can be defined through a separate textfile, or in the command itself. Is ther ...
snp kissplice written 13 months ago by celine0 • updated 13 months ago by marchetcamille10

Latest awards to celine

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 903 users visited in the last hour