User: ivan.molodtsov

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10
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New User
Location:
Russia, Moscow
Last seen:
5 months, 3 weeks ago
Joined:
3 years ago
Email:
i*************@gmail.com

Posts by ivan.molodtsov

<prev • 3 results • page 1 of 1 • next >
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BIC-seq2 for detecting CNVs in mouse mm10-mapped WGS data
... Hi! I'm interested in detecting copy number alterations in some mouse WGS data, specifically in locating regions of gene amplification and their boundaries. Never faced such a task before, so I googled it and BIC-seq / BIC-seq2 seems to be a good choice for a tool. However, as the manual states (ht ...
sequencing mm10 bic-seq2 cnv mouse written 2.1 years ago by ivan.molodtsov10
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Comment: C: TopHat Failed In 'Reporting output tracks' Stage
... Thanks for response! It was a machine with 32Gb RAM and app. 900 Gb of free storage space, so I wouldn't expect any kind of memory problems. The 'failed to retrieve right read for pair' mistake puzzles me as well ...
written 3.0 years ago by ivan.molodtsov10
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TopHat Failed In 'Reporting output tracks' Stage
... Hello everyone! I've encountered the following problem while doing study on EncodeProject data, maybe someone here would be able to give me an advice! I've downloaded raw sequencing data for library ENCLB555APY from [https://www.encodeproject.org/experiments/ENCSR000CPY/][1] and tried to map it on ...
software error tophat tophat2 rna-seq written 3.0 years ago by ivan.molodtsov10 • updated 23 months ago by zuolin.bai0

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Popular Question 22 months ago, created a question with more than 1,000 views. For TopHat Failed In 'Reporting output tracks' Stage

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