User: mms140130

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mms14013030
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m********@utdallas.edu

Posts by mms140130

<prev • 46 results • page 1 of 5 • next >
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where can I find the race data of the Prostate cancer PRAD patients
... Hi, Can someone help me to find the data about the race of the PRDA patients Please , Thank you ...
genome snp written 9 days ago by mms14013030
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different methods to account for population stratification
... Hi, I think i might be missing something but I have read several articles about accounting for population stratification , using methods like MDS, PCA , EIGENSTART and so on my question what is the output of these methods, I mean what should I expect by applying this methods , do they provide a be ...
gene snp written 15 days ago by mms14013030
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what is the difference between Random ,differentiated and causal SNPs
... Hi, I would like to know the difference between Random, differentiated and causal SNPs that are repeated in articles when they do simulation studies regard the population stratification in addtion what is the ancestral risk in admixed population?? Thank you, ...
snp written 15 days ago by mms14013030
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Find SNPs genotype data for BRCA for both Normal and tumor tissues
... Hello, Can anyone tells me where can I find the SNPs data for BRCA patients and also the gene expression data. for both normal and tumor tissues ...
snp rna-seq written 19 days ago by mms14013030
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Comment: C: SNP Data Quality control
... Thank you all the issue is I'm new to genetics and I'm trying to understand how to analyze such data ...
written 19 days ago by mms14013030
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Comment: C: SNP Data Quality control
... Done I have changed the title and add some information ...
written 22 days ago by mms14013030
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SNP Data Quality control
... Hi, I have a 905460 snp genotype data with 1096 patients, I have used the "HardyWeinberg" R package and removed the maf that is less than 0.05, the data reduced to 746907, then I applied the HWexact test using alpha as 0.001 and the data reduced to 384660. Is this OK? or too much data was lost ...
R snp written 22 days ago by mms14013030 • updated 17 days ago by Biostar ♦♦ 10
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Comment: C: firebrowse.org website Question
... I found the data need just choose the BRCA select cohort and click on the clinical the blue bar to the right and download the Clinical_Pick_Tier1 ...
written 4 weeks ago by mms14013030
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Comment: C: TCGA barcode for SNP sample
... could you please if you don't mind have a look at my question https://[www.biostars.org/p/238939/][1] [1]: http://www.biostars.org/p/238939/ ...
written 4 weeks ago by mms14013030
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firebrowse.org website Question
... Hello I hope I can ask this question here I have data about BRCA, and the barcode should tell the race of each patient which I don't know I was directed to the firebrowse.org website http://[firebrowse.org][1] and I typed BRCA in the chorot abbrev and clicked view analysis profile it showed the ...
snp written 4 weeks ago by mms14013030

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