User: stacy734

gravatar for stacy734
stacy7340
Reputation:
0
Status:
New User
Last seen:
1 month, 1 week ago
Joined:
3 months, 1 week ago
Email:
s*******@yahoo.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by stacy734

<prev • 4 results • page 1 of 1 • next >
0
votes
0
answers
67
views
0
answers
Does Minia discard singletons?
... Hi everyone, I am working with some Minia assemblies. These were run using the no-length-cutoff parameter. Normally I discard small contigs, but I like to see what comes out before i do. My question: when using the no-length-cutoff parameter, does Minia keep everything, even the singletons, read ...
minia written 5 weeks ago by stacy7340
0
votes
0
answers
193
views
0
answers
Comment: C: Question about k-mer genie output
... Thank you for the sane advice. I will proceed with multiple assemblies with different k-mers. ...
written 11 weeks ago by stacy7340
0
votes
0
answers
193
views
0
answers
Question about k-mer genie output
... Hi everyone, I installed k-mer genie and ran it on a 120GB Illumina dataset. I get this output: ______________________ running histogram estimation Extrapolating number of distinct kmers 70000| processing | [-- ...
k-mer kmer kmer genie written 12 weeks ago by stacy7340
1
vote
1
answer
250
views
1
answer
Minia estimated genome size
... Hi everyone, I'm experimenting with Minia for genome assembly of a eukaryote with a 500 MB genome size. I've had good luck adjusting the parameters to find the optimum, except for one: estimated_genome_size. The manual suggests this: estimated_genome_size And I have added this to the command li ...
genome assembly minia written 3 months ago by stacy7340 • updated 3 months ago by Rayan Chikhi1.1k

Latest awards to stacy734

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 516 users visited in the last hour