User: Hughie

gravatar for Hughie
Hughie30
Reputation:
30
Status:
New User
Location:
guangzhou
Last seen:
3 weeks, 6 days ago
Joined:
9 months, 1 week ago
Email:
9********@qq.com

A beginner in bioinformatics.

Posts by Hughie

<prev • 22 results • page 1 of 3 • next >
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RSeQC geneBody_coverage and RPKM_saturation result exlaination
... Hello! Recently I'm doing post mapping quality check using RSeQC. I mainly checked geneBody_coverage and RPKM_saturation using its python module, but I don't know what's good and bad result, so I post my result here and wish your help. ![geneBody_coverage][1] I can't explain the result, I guess ...
genome alignment next-gen rna-seq sequencing written 4 weeks ago by Hughie30
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Comment: C: FastQC's report -- 'Per base sequence content' heading odd wave
... Thank you James! I will check the kit and find out the reason. ...
written 8 weeks ago by Hughie30
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Comment: C: FastQC's report -- 'Per base sequence content' heading odd wave
... Thank you lelle! So do you think it's necessary to trim the header 10 bases? ...
written 8 weeks ago by Hughie30
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Comment: C: FastQC's report -- 'Per base sequence content' heading odd wave
... Thank you genomax! You are always so kindly! The additional information is so useful, Thank you again. ...
written 8 weeks ago by Hughie30
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FastQC's report -- 'Per base sequence content' heading odd wave
... Hello! I'm a beginner of bioinformatics and recently I got some FastQC report when QC my RNA-seq data, but I can't understand the odd situations showing below. https://ibb.co/caxZEv https://ibb.co/hU7ZEv https://ibb.co/cnSZEv I want to know what caused the heading odd waves and how to handle th ...
rna-seq written 9 weeks ago by Hughie30 • updated 9 weeks ago by genomax34k
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Comment: C: How to identify your analytic data is true?
... Thank you Michael for your kindly behavior! I meant closer to "measurement error", and do you know some bioinformatic methods to judge? Thank you again. ...
written 9 weeks ago by Hughie30
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Comment: C: How to identify your analytic data is true?
... Thank you venu for your kindly sample and suggestion! ...
written 9 weeks ago by Hughie30
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Comment: C: How to identify your analytic data is true?
... Thank you Santosh for your kindly suggestion! ...
written 9 weeks ago by Hughie30
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Comment: C: How to identify your analytic data is true?
... Thank you genomax for your kindly suggestion! ...
written 9 weeks ago by Hughie30
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Comment: C: How to identify your analytic data is true?
... Thank you! h.mon I'm sorry for my amphibolous explaination. I mean that if I got experimental samples and sequenced them, how can I assert these data is want I need which reflects some experimental conditions. You can ignore "your data is true". ...
written 9 weeks ago by Hughie30

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