User: melania 2282

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melania 2282100
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Posts by melania 2282

<prev • 90 results • page 1 of 9 • next >
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Comment: C: Transforming big file
... Yes exactly , the problem its not only transpose but also to separate columns . Thank you very much , I will test this solution ...
written 1 day ago by melania 2282100
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Transforming big file
... Hello, I have a very large text file with 500 000 columns and 220 rows inside each columns i have 4 different values like this ``` > Sample_name "VAR1" "VAR2" > Sample1 "-0.0570 0.0113 1.035 0.061" " -0.3631 0.0 ...
snp written 1 day ago by melania 2282100 • updated 1 day ago by bioinformatics2020520
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Comment: C: Script bash to split columns
... thank you very much ...
written 1 day ago by melania 2282100
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Comment: C: Script bash to split columns
... thank you very much ...
written 1 day ago by melania 2282100
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Script bash to split columns
... Hello, I have a data file with 4 values in same column. How to split each column in 4 labelled columns v1, v2,v3 and v4 with bash or R or python ? example of my file : Barcode "FD1133" "FD1138" 102 "-0.0570 0.0113 1.035 0 ...
bash script split written 1 day ago by melania 2282100 • updated 1 day ago by Mensur Dlakic7.2k
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Comment: C: CNV data from Illumina OncoArray Cheap analysis
... Thank you very much bernatgel ...
written 3 days ago by melania 2282100
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Comment: C: CNV data from Illumina OncoArray Cheap analysis
... Thank you barnatgel , Yes I have the position for these SNPs. It's human germline DNA. So could you please suggest me some program for such analysis ? ...
written 3 days ago by melania 2282100
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CNV data from Illumina OncoArray Cheap analysis
... Hello I have two output files from illumina bedcheap contaning results of logR (ratio), B allele frequency, X, Y. Thes files were proceeded with illumina GenomeStudio. Could yo please suggest tools to explore this type of files ? Thank you very much ...
snpchip cnv gwas written 6 days ago by melania 2282100
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Local association plot with annotation data
... Hello, Please I would like to draw a plot of my GWAS hits with LD information (from my population) and annotaion data ( gene, biotype, function .. ) Do you have any idea of programs doing this ? Thank you ! ...
genome gene snp written 7 weeks ago by melania 2282100 • updated 6 weeks ago by sharoncherry7800
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Simons Diversity Project
... Hello I downloaded phased data from this link [SGDP phased data][1] [1]: https://sharehost.hms.harvard.edu/genetics/reich_lab/sgdp/phased_data/ 1. Could you confirm that hg38 assembly was used for this data set ? 2. What is the difference between PS2 and PS3 ? Thank you very much ...
genome assembly alignment written 10 weeks ago by melania 2282100

Latest awards to melania 2282

Popular Question 9 weeks ago, created a question with more than 1,000 views. For Phasing with SHAPEIT
Supporter 11 months ago, voted at least 25 times.

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