User: bwczech

gravatar for bwczech
bwczech0
Reputation:
0
Status:
New User
Last seen:
1 day, 18 hours ago
Joined:
9 months, 3 weeks ago
Email:
b******@wp.pl

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by bwczech

<prev • 14 results • page 1 of 2 • next >
0
votes
1
answer
147
views
1
answer
Integrated DNA and RNA sequences in expression analysis
... Hi, How to integrate a dna (WGS) and rna (RNA-seq) in genes expression analysis. I have three individuals with their whole-genome sequences (3 samples) and moreover I would like to get their transcriptome sequences from their 2 tissues (2 x 3 samples). How to use DNA and RNA together to analysis ...
dna-seq rna-seq written 2 days ago by bwczech0 • updated 22 hours ago by ori20
0
votes
0
answers
102
views
0
answers
Comment: C: RNA-Seq and WGS analysis applied in genes expression
... Any idea? How to analyse Gene Expression based on RNA and DNA sequences together? ...
written 4 days ago by bwczech0
0
votes
0
answers
102
views
0
answers
RNA-Seq and WGS analysis applied in genes expression
... Hello, I need to find some publications about an analysis of the diversity of gene expression based on WGS and RNA-Seq. I would like to sequent the genome and the transtripts (a sample of liver tissue and muscle tissue) in three individuals of pig. I would like to explain differences in expressi ...
gene wgs expression rna-seq written 4 days ago by bwczech0
0
votes
2
answers
181
views
2
answers
Comment: C: Number of SNPs in VCF
... hmm, how to explain it... I just need to get a information about total number of variants for every breed. ...
written 6 days ago by bwczech0
0
votes
2
answers
181
views
2
answers
Comment: C: Number of SNPs in VCF
... Sorry, my mistakes. I have only SNPs in my file. So I need. a total number of variants for each breeds (excluding 100% missing for breed). My mistake. Now is it clear? ...
written 6 days ago by bwczech0
0
votes
2
answers
181
views
5 follow
2
answers
Number of SNPs in VCF
... Hey, I have multisample VCF contains a information about 7 breed (in sum about 1000 individuals). Their ID are: SIM001, SIM002, ..., SIM034, FLV001, FLV002, FLV034 ... I need to obtain a information about sum SNPs for every breed (SIMXXX is a one breed, FLV is a second breed and so on...). Have ...
vcftools snp written 6 days ago by bwczech0 • updated 5 days ago by Russ160
0
votes
4
answers
143
views
4
answers
Comment: C: VCF with SNP- count number of 100% missing genotypes
... but it will be impossible to run this on my files, which are on the server. I can't download it, because its too big file :( ...
written 19 days ago by bwczech0
0
votes
4
answers
143
views
4
answers
Comment: C: VCF with SNP- count number of 100% missing genotypes
... I can not use it on my server. I can not install new softs. Exist any other option, to get this 100% missing data, using any bash, vcftools, beagle or another? ...
written 19 days ago by bwczech0
0
votes
4
answers
143
views
4
answers
Comment: C: VCF with SNP- count number of 100% missing genotypes
... Which command allow me to exclude this 100% missing data? ...
written 19 days ago by bwczech0
0
votes
4
answers
143
views
4
answers
Answer: A: VCF with SNP- count number of 100% missing genotypes
... Look up. I told I am extracting from multisample file each breed and it generate empty variable. In my VCF file I have many breeds. I am extracting just one, and this file contain a null variable, but other breed in the same position, SNP was detected. ...
written 19 days ago by bwczech0

Latest awards to bwczech

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1341 users visited in the last hour