User: mahfuz.290066
mahfuz.290066 • 10
- Reputation:
- 10
- Status:
- New User
- Location:
- kagoshima University Japan
- Last seen:
- 7 months, 2 weeks ago
- Joined:
- 1 year, 6 months ago
- Email:
- m************@gmail.com
Posts by mahfuz.290066
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... Hi, I need a dog and cat Genome contigs in fasta format also the identifiers should be unique. I am not a bioinformatician. So i know a little about it. Please give me a guideline how can i make this through galaxy tools. Thanks in advance for your kind support.
mahfuz
KU, Japan ...
written 7 months ago by
mahfuz.290066 • 10
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... Hi, gurjeetkaur268, Can you solve the problem?. I also want to do sRNA analysis for Novel microRNA. Can you refer the company, please. Thank you in advance for your kind help. ...
written 8 months ago by
mahfuz.290066 • 10
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... Hello everybody, I am not a bioinformatician, I don’t know anything about command line function. But I need to analyze my small RNA seq data. I want to use miRdeep2 to search for the novel microRNA in my seq.However, I also know about miRdeep* but I want to analyze my data by miRdeep2 as it has mor ...
written 8 months ago by
mahfuz.290066 • 10
• updated
7 months ago by
Biostar ♦♦ 20
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C: genome index for miRdeep*
... Thanks a lot for your kind help @ Gjan ...
written 8 months ago by
mahfuz.290066 • 10
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C: genome index for miRdeep*
... Thanks a lot Gjain for your helpful suggestion, But i don't know actually how to install ubuntu on a virtual box. is there any guide or tutorial you can suggest for me plz.
Thanks a lot again
...
written 9 months ago by
mahfuz.290066 • 10
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... Hello everybody, I am not a bio-informatician that's why i don't know how to use the command line function. but I need to analyze my small RNA seq data. I did it a little but now I want to use miRdeep* to search for the novel microRNA in my seq. However, the problem is my small RNA seq is from dog ...
written 9 months ago by
mahfuz.290066 • 10
• updated
9 months ago by
Gjain ♦ 5.2k
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... Hi i have some transcript id like
ENSCAFT00000059187.1
ENSCAFT00000059235.1
ENSCAFT00000059242.1
ENSCAFT00000059247.1
how can i get the gene symbol from these ids......
thanks in advances
...
written 16 months ago by
mahfuz.290066 • 10
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16 months ago by
cpad0112 • 8.9k
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C: Deferentially expressed genes
... Very very thanks for your reply. i worked with melanoma in human. I got my differentially expressed genes by analyzing through CLC workbench Actually, i read some of the papers. But i did not get a clear idea what should i do with the GO terms or how can i find a melanoma triggering pathways. I got ...
written 18 months ago by
mahfuz.290066 • 10
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... Hello, I am a new guy in the RNA seq study. I found 989 up regulated and 1009 down regulated genes from the NGS data after sorting out on the basis of FDR, FC and P value. But I don't know how can I do further downstream analysis like GO or pathway or any other (maybe I don't know). And also how ca ...
written 18 months ago by
mahfuz.290066 • 10
• updated
18 months ago by
EagleEye ♦ 5.6k
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