User: mahfuz.290066

gravatar for mahfuz.290066
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New User
Location:
kagoshima University Japan
Last seen:
7 months, 2 weeks ago
Joined:
1 year, 6 months ago
Email:
m************@gmail.com

Posts by mahfuz.290066

<prev • 9 results • page 1 of 1 • next >
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Genome contigs in FASTA formate
... Hi, I need a dog and cat Genome contigs in fasta format also the identifiers should be unique. I am not a bioinformatician. So i know a little about it. Please give me a guideline how can i make this through galaxy tools. Thanks in advance for your kind support. mahfuz KU, Japan ...
genome written 7 months ago by mahfuz.29006610
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Comment: C: Novel MicroRNA prediction with Mirdeep 2.
... Hi, gurjeetkaur268, Can you solve the problem?. I also want to do sRNA analysis for Novel microRNA. Can you refer the company, please. Thank you in advance for your kind help. ...
written 8 months ago by mahfuz.29006610
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sRNA analysis by miRdeep2
... Hello everybody, I am not a bioinformatician, I don’t know anything about command line function. But I need to analyze my small RNA seq data. I want to use miRdeep2 to search for the novel microRNA in my seq.However, I also know about miRdeep* but I want to analyze my data by miRdeep2 as it has mor ...
rna-seq written 8 months ago by mahfuz.29006610 • updated 7 months ago by Biostar ♦♦ 20
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Comment: C: genome index for miRdeep*
... Thanks a lot for your kind help @ Gjan ...
written 8 months ago by mahfuz.29006610
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Comment: C: genome index for miRdeep*
... Thanks a lot Gjain for your helpful suggestion, But i don't know actually how to install ubuntu on a virtual box. is there any guide or tutorial you can suggest for me plz. Thanks a lot again ...
written 9 months ago by mahfuz.29006610
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genome index for miRdeep*
... Hello everybody, I am not a bio-informatician that's why i don't know how to use the command line function. but I need to analyze my small RNA seq data. I did it a little but now I want to use miRdeep* to search for the novel microRNA in my seq. However, the problem is my small RNA seq is from dog ...
rna-seq written 9 months ago by mahfuz.29006610 • updated 9 months ago by Gjain5.2k
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Transcript Id conversion
... Hi i have some transcript id like ENSCAFT00000059187.1 ENSCAFT00000059235.1 ENSCAFT00000059242.1 ENSCAFT00000059247.1 how can i get the gene symbol from these ids...... thanks in advances ...
gene rna-seq written 16 months ago by mahfuz.29006610 • updated 16 months ago by cpad01128.9k
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Comment: C: Deferentially expressed genes
... Very very thanks for your reply. i worked with melanoma in human. I got my differentially expressed genes by analyzing through CLC workbench Actually, i read some of the papers. But i did not get a clear idea what should i do with the GO terms or how can i find a melanoma triggering pathways. I got ...
written 18 months ago by mahfuz.29006610
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Deferentially expressed genes
... Hello, I am a new guy in the RNA seq study. I found 989 up regulated and 1009 down regulated genes from the NGS data after sorting out on the basis of FDR, FC and P value. But I don't know how can I do further downstream analysis like GO or pathway or any other (maybe I don't know). And also how ca ...
next-gen written 18 months ago by mahfuz.29006610 • updated 18 months ago by EagleEye5.6k

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