User: ali.hassan.nehme

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Posts by ali.hassan.nehme

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Comment: C: WGCNA consensus network issue creating module-trait relationship
... You should make sure that you are using numbers in your argument. If one of the variables used in the equation is a character vector, the results would be NAs. ...
written 8 months ago by ali.hassan.nehme0
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Answer: A: Consensus module detection using WGCNA
... You should identify the common genes between the two data sets and use them to do the consensus module analysis. ...
written 8 months ago by ali.hassan.nehme0
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Meta-analysis: How to join data from different platforms
... Hello, I downloaded microarray raw data obtained using different platforms (affymetrix HG_U133PLUS2, HG_U133A and HG_U133B). Is there a way to join the data from different platforms into one data set? Is it possible to join data from Illumina and Affymetrix platforms? Thank you, ...
normalization meta-analysis written 3.7 years ago by ali.hassan.nehme0
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Workflow for removing batch effect between different studies: meta-analysis
... Hello, I am doing a microarray meta-analysis on ~ 3500 samples. all the samples were obtained using the same platform (affymetrix HG_U133PLUS2). Raw data from different studies were downloaded, mixed, then normalized using RMA. I would appreciate if somebody can answer these 2 questions: 1- is it ...
batch meta-analysis filtering microarray written 3.7 years ago by ali.hassan.nehme0

Latest awards to ali.hassan.nehme

Popular Question 2.6 years ago, created a question with more than 1,000 views. For Meta-analysis: How to join data from different platforms
Popular Question 2.6 years ago, created a question with more than 1,000 views. For Workflow for removing batch effect between different studies: meta-analysis

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