User: Guilherme
Guilherme • 20
- Reputation:
- 20
- Status:
- New User
- Location:
- Brazil
- Last seen:
- 6 months, 4 weeks ago
- Joined:
- 7 years ago
- Email:
- g*********@gmail.com
PhD student at the University of São Paulo - USP. Working with molecular genetics, human genetics, genetic populations, bioinformatics.
Posts by Guilherme
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... Hi Priyabrata,
Not exactly. This is something that I've already done as you can see on the image above. Each polymorphism were coded as 0/1/2 based on their genotype combination (e.g AA = 0, AG = 1, GG = 2).
I have determined the phase (with PHASE program) of these 13 polymorphism, generating 17 u ...
written 7 months ago by
Guilherme • 20
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... I have phased haplotypes based on 13 SNPs, which generated 17 unique haplotypes on my case-control data. I've done the logistic regression association test on SPSS for the genotypes (independently), coding each SNP with and additive mode (0, 1, 2).
Now that I have the haplotypes (generated with PHA ...
written 7 months ago by
Guilherme • 20
• updated
7 months ago by
pbpanigrahi • 180
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... Thank you so much for the enlightenment Kevin! I'm going to take a look at PCA. ...
written 12 months ago by
Guilherme • 20
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... Hello,
I have done an analysis in STRUCTURE to get individual ancestry estimation in my population sample. My population is a tri-hybrid population with ancestry of European, African and Amerindian.
My question is:
Since It's a tri-hybrid admixed population, do I have to include in the logistic r ...
written 12 months ago by
Guilherme • 20
• updated
12 months ago by
Kevin Blighe ♦ 37k
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... Yep...sublime text is the one! Keep in your mind these words "Multiple Selects"!
...
written 4.9 years ago by
Guilherme • 20
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... Good Afternoon...
I'm wondering if there.s a way to convert a simple plink format file (.ped and .map), to vcf format!? Thank you all!!
Best wishes,
Guilherme
...
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Comment:
C: 1000Genomes To Haploview
... Both answers fixed my problem!! Thank you very much caddymob!!! Guilherme ...
written 7.0 years ago by
Guilherme • 20
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Comment:
C: 1000Genomes To Haploview
... Both answers fixed my problem!! Thank you very much Laura!!!
Guilherme ...
written 7.0 years ago by
Guilherme • 20
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... Good Morning,
My name is Guilherme and first off all I would like to leave here my excuses for the possible dumb question, because I'm relative new in the Bioinfo. area…..so here's my question......
I would like to know if there is a way to convert the VCF files (I got sequences of a region of inte ...
Latest awards to Guilherme
Great Question
4.9 years ago,
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For 1000Genomes To Haploview
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4.9 years ago,
created a question with more than 1,000 views.
For Convert Pedmap To Vcf File
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4.9 years ago,
has more than 80 characters in the information field of the user's profile.
Popular Question
7.0 years ago,
created a question with more than 1,000 views.
For 1000Genomes To Haploview
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