User: Guilherme
Guilherme • 20
- Reputation:
- 20
- Status:
- New User
- Location:
- Brazil
- Last seen:
- 3 months, 3 weeks ago
- Joined:
- 6 years, 9 months ago
- Email:
- g*********@gmail.com
PhD student at the University of São Paulo - USP. Working with molecular genetics, human genetics, genetic populations, bioinformatics.
Posts by Guilherme
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... Hi Priyabrata,
Not exactly. This is something that I've already done as you can see on the image above. Each polymorphism were coded as 0/1/2 based on their genotype combination (e.g AA = 0, AG = 1, GG = 2).
I have determined the phase (with PHASE program) of these 13 polymorphism, generating 17 u ...
written 4 months ago by
Guilherme • 20
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... I have phased haplotypes based on 13 SNPs, which generated 17 unique haplotypes on my case-control data. I've done the logistic regression association test on SPSS for the genotypes (independently), coding each SNP with and additive mode (0, 1, 2).
Now that I have the haplotypes (generated with PHA ...
written 4 months ago by
Guilherme • 20
• updated
4 months ago by
pbpanigrahi • 180
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... Thank you so much for the enlightenment Kevin! I'm going to take a look at PCA. ...
written 9 months ago by
Guilherme • 20
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... Hello,
I have done an analysis in STRUCTURE to get individual ancestry estimation in my population sample. My population is a tri-hybrid population with ancestry of European, African and Amerindian.
My question is:
Since It's a tri-hybrid admixed population, do I have to include in the logistic r ...
written 9 months ago by
Guilherme • 20
• updated
9 months ago by
Kevin Blighe ♦ 32k
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... Yep...sublime text is the one! Keep in your mind these words "Multiple Selects"!
...
written 4.6 years ago by
Guilherme • 20
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... Good Afternoon...
I'm wondering if there.s a way to convert a simple plink format file (.ped and .map), to vcf format!? Thank you all!!
Best wishes,
Guilherme
...
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Comment:
C: 1000Genomes To Haploview
... Both answers fixed my problem!! Thank you very much caddymob!!! Guilherme ...
written 6.8 years ago by
Guilherme • 20
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Comment:
C: 1000Genomes To Haploview
... Both answers fixed my problem!! Thank you very much Laura!!!
Guilherme ...
written 6.8 years ago by
Guilherme • 20
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... Good Morning,
My name is Guilherme and first off all I would like to leave here my excuses for the possible dumb question, because I'm relative new in the Bioinfo. area…..so here's my question......
I would like to know if there is a way to convert the VCF files (I got sequences of a region of inte ...
Latest awards to Guilherme
Great Question
4.6 years ago,
created a question with more than 5,000 views.
For 1000Genomes To Haploview
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4.6 years ago,
created a question with more than 1,000 views.
For Convert Pedmap To Vcf File
Autobiographer
4.6 years ago,
has more than 80 characters in the information field of the user's profile.
Popular Question
6.8 years ago,
created a question with more than 1,000 views.
For 1000Genomes To Haploview
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