User: mannoulag1

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mannoulag160
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Posts by mannoulag1

<prev • 38 results • page 1 of 4 • next >
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Comment: C: Annotation Affymetrix probesets to Gene symbols
... yes, excellent !! thank you very very much Kevin ...
written 11 months ago by mannoulag160
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Comment: C: Annotation Affymetrix probesets to Gene symbols
... Hi kevin, thank you very much, so I did this: library("biomaRt") library(hgu95av2.db) mart <- useMart("ENSEMBL_MART_ENSEMBL") mart <- useDataset("hsapiens_gene_ensembl", mart) annotLookup <- getBM(mart=mart, attributes=c("affy_hg_u95av2","hgnc_sym ...
written 11 months ago by mannoulag160
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Annotation Affymetrix probesets to Gene symbols
... Hi, I am using an 'Affymetrix Human Genome U95 Version 2 Array', I would like to replace the affymetrix probes with the gene symbols in my data matrix 'human'. which one of these code can I use and how correct it please? require("biomaRt") mart <- useMart("ENSEMBL_MART_ENSEMBL") ...
gene R rna-seq affymetrix written 11 months ago by mannoulag160 • updated 11 months ago by Kevin Blighe65k
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Comment: C: Affymetrix probesets to Gene symbols
... I will try it, thank you, I edit the question ...
written 11 months ago by mannoulag160
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Affymetrix probesets to Gene symbols
... Hi I have a expression data matrix 'mat' and I would like to replace the affymetrix probes with the gene symbols. I did this code: library(hgu95av2.db) x <- hgu95av2SYMBOL # Get the probe identifiers that are mapped to a gene symbol mapped_probes <- mappedkeys(x) ...
gene R rna-seq written 11 months ago by mannoulag160
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Comment: C: TFBS enrichiment analysis
... thank you, I will try it. ...
written 20 months ago by mannoulag160
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Comment: C: TFBS enrichiment analysis
... ok , thank you very much Alex. ...
written 20 months ago by mannoulag160
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Comment: C: TFBS enrichiment analysis
... thank you very much, but I am looking for a R package. ...
written 20 months ago by mannoulag160
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Comment: C: TFBS enrichiment analysis
... Thank you Alex for your help, but I am using R3.5.1 for Windows. Can you help me please? ...
written 20 months ago by mannoulag160
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TFBS enrichiment analysis
... Hi, I have a list of Arabidopsis gene symbols, how to do the enrichment analysis to identify their Transcription factors? It is possible to do this by TFBStools package? thanks ...
gene R jaspar arabidopsis tfbstools written 20 months ago by mannoulag160 • updated 6 months ago by Alex Reynolds30k

Latest awards to mannoulag1

Popular Question 10 months ago, created a question with more than 1,000 views. For Analysis of GEO2R
Popular Question 10 months ago, created a question with more than 1,000 views. For photosynthesis genes of the plant 'arabidopsis'
Popular Question 17 months ago, created a question with more than 1,000 views. For Analysis of GEO2R
Popular Question 17 months ago, created a question with more than 1,000 views. For GO analysis using topGO
Student 20 months ago, asked a question with at least 3 up-votes. For TFBS enrichiment analysis
Popular Question 23 months ago, created a question with more than 1,000 views. For Analysis of GEO2R

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