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Comment: Comment: Calculating percentage of cells proliferating in single cell rna seq data
5 weeks ago by Haci ▴ 690
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269
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Comment: Comment: merging Seurat objects after SCT
6 weeks ago by Haci ▴ 690
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1
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664
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Comment: Comment: DESeq2 Multifactor Design
6 weeks ago by Haci ▴ 690
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664
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Comment: Comment: DESeq2 Multifactor Design
6 weeks ago by Haci ▴ 690
2
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1
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664
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Comment: Comment: DESeq2 Multifactor Design
6 weeks ago by Haci ▴ 690
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279
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Comment: Comment: RNA seq normalization and gene gene correlation
6 weeks ago by Haci ▴ 690
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1
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332
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Comment: Comment: How to row normalize a matrixplot?
7 weeks ago by Haci ▴ 690
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312
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Comment: Comment: P-value Threshold Consideration in Multi-Sample RNA-Seq Experiment
8 weeks ago by Haci ▴ 690
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343
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Comment: Comment: How to compare bulk RNA seq data demultiplexed in different ways?
8 weeks ago by Haci ▴ 690
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642
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Comment: Comment: Installing Cell Ranger
8 weeks ago by Haci ▴ 690
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237
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Comment: Comment: Finding chimeric reads for CRISPR edited mouse cells from RNA-Seq data
8 weeks ago by Haci ▴ 690
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378
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Comment: Comment: how to convert SummarizedExperiment files to DESeqDataSet??
11 weeks ago by Haci ▴ 690
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1
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378
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Comment: Comment: how to convert SummarizedExperiment files to DESeqDataSet??
11 weeks ago by Haci ▴ 690
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1
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378
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Comment: Comment: how to convert SummarizedExperiment files to DESeqDataSet??
11 weeks ago by Haci ▴ 690
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1
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376
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Comment: Comment: transcriptomic data for molecular subtyping
3 months ago by Haci ▴ 690
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652
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Comment: Comment: RNAseq analysis: how to add new gene into an existing worm based reference
4 months ago by Haci ▴ 690
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1
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631
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Comment: Comment: plotCounts() error in R: indexing outside of limit
4 months ago by Haci ▴ 690
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2
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631
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Comment: Comment: plotCounts() error in R: indexing outside of limit
4 months ago by Haci ▴ 690
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503
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Comment: Comment: Edit fasta header for TSA submission
7 months ago by Haci ▴ 690
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1
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587
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Comment: Comment: What to do after importing quantification with tximport
9 months ago by Haci ▴ 690
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2.3k
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Comment: Comment: How to create a Seurat object from the `xxx_metadata.txt.gz ` and `xxx_counts.t
11 months ago by Haci ▴ 690
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1
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11k
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Comment: C: cellranger count help
3.9 years ago by Haci ▴ 690
1
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1
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2.9k
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Comment: C: What are good packages to find Differentially Expressed Genes from RNASeq RSEM a
4.0 years ago by Haci ▴ 690
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1.9k
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Comment: C: Seurat integrated analysis - methods for cell-type specific responses
4.1 years ago by Haci ▴ 690
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0
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3.8k
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Comment: C: Legends in FeaturePlot of Seurat Package
4.1 years ago by Haci ▴ 690
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1
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1.3k
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Comment: C: MUC5AC is not present in deseq2 results
4.2 years ago by Haci ▴ 690
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1
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1.3k
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Comment: C: MUC5AC is not present in deseq2 results
4.2 years ago by Haci ▴ 690
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0
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11k
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Comment: C: cellranger count help
4.2 years ago by Haci ▴ 690
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2
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11k
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Comment: C: cellranger count help
4.2 years ago by Haci ▴ 690
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0
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1.5k
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Comment: C: SCRNAseq vs qRT PCR
4.2 years ago by Haci ▴ 690
4
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1
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8.7k
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Comment: C: removing overrepresented sequences from rna-seq
4.2 years ago by Haci ▴ 690
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1.2k
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Comment: C: sample-specific filtering of counts matrix
4.2 years ago by Haci ▴ 690
1
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1
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4.8k
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Comment: C: how to unpack sra file?
4.2 years ago by Haci ▴ 690
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1.4k
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Comment: C: Bac-end mapping to a genome
4.2 years ago by Haci ▴ 690
1
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1
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1.4k
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Comment: C: Bac-end mapping to a genome
4.2 years ago by Haci ▴ 690
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1
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1.0k
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Comment: C: what can i do with R2 reads
4.2 years ago by Haci ▴ 690
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9.4k
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Comment: C: Seurat integration of two datasets - GSE126783
4.3 years ago by Haci ▴ 690
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0
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3.1k
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Comment: C: best way to combine RNAseq data from different sequencing batches
4.3 years ago by Haci ▴ 690
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1
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1.2k
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Comment: A: featurecounts output changes the underscores in the sample name into dots
4.3 years ago by Haci ▴ 690
1
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0
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3.1k
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Comment: C: Cox proportional hazards regression use log2 fpkm
4.6 years ago by Haci ▴ 690
0
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1
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2.5k
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Comment: C: Mapping Entrez gene ids to Ensembl ids
4.7 years ago by Haci ▴ 690
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1
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1.8k
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Comment: C: how to set Deseq factor
4.7 years ago by Haci ▴ 690
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0
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1.8k
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Comment: C: how to set Deseq factor
4.7 years ago by Haci ▴ 690
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0
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2.4k
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Comment: C: count matrices for genes and transcripts for all samples
4.7 years ago by Haci ▴ 690
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0
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1.9k
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Comment: C: scRNAseq: How to select your reference dataset for cell type identification
4.8 years ago by Haci ▴ 690
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0
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3.1k
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Comment: C: How to use WhichCells Function to label clusters
4.8 years ago by Haci ▴ 690
2
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2
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9.9k
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Comment: C: scRNA-seq, SEURAT, NormalizeData, ScaleData, PCA, CCA ...
5.5 years ago by Haci ▴ 690
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