User: unique_g

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unique_g80
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Posts by unique_g

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Comment: C: CWL: Allowed values for parameters
... Following Michael's suggestion to work something out here, I would definitely be interested to tackle this together. Do you have any experience or suggestions on how to work on this? Would anything on schema.org be of any use? And anyway, how did you solve this in your Common Tool Description? Could ...
written 2.7 years ago by unique_g80
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CWL: Custom data types
... **Is there a way (or what is the preferred way) to define *custom data types* for parameters?** Together with *[allowed values][1]*, custom types would enable us to link a parameter interfaced to the end user of a web service running CWL workflows to a suitable frontend component in the service's co ...
cwl written 3.2 years ago by unique_g80
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CWL: Allowed values for parameters
... We are interested in developing a web service that automatically renders CWL workflows and interfaces selected parameters for the user to set via the web service's UI (e.g. by rendering parameter-specific Angular components). In the interest of user experience and security, the values set by the use ...
cwl written 3.2 years ago by unique_g80 • updated 2.7 years ago by Michael R. Crusoe1.8k
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Comment: C: CWL: Loops and if conditionals
... Thanks a lot for the suggestion. However, I would like to avoid wrapping scripts/tools or even refactoring them (assuming I have control over the code) just to meet such a specific purpose. It would be kinda weird to end up having a flag `--execute` or `--pass-through` in all future scripts, no? :- ...
written 3.2 years ago by unique_g80
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Comment: C: CWL: Loops and if conditionals
... I'm sorry, but it seems that I didn't explain my question well. In fact, the whole data will indeed either need pre-processing or not need pre-processing (in which case the whole pre-processing `CommandLineTool` should ideally be entirely skipped). Moreover, "Pre-processing required?" wasn't actual ...
written 3.2 years ago by unique_g80
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Comment: C: CWL: Loops and if conditionals
... So just to confirm: There is currently no way of implementing a *single* workflow that, say, dynamically skips a step such as in the following example? ![Skipping a step during CWL execution][1] [1]: https://image.ibb.co/cm96qk/skipping_steps.png ...
written 3.2 years ago by unique_g80

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Student 3.2 years ago, asked a question with at least 3 up-votes. For Automatic rendering of customizable CWL workflows: allowed values

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