Moderator: zx8754

gravatar for zx8754
zx87544.7k
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"If you torture the data long enough, it will confess." - Ronald Coase

Posts by zx8754

<prev • 507 results • page 1 of 51 • next >
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Comment: C: SNP Prioritization Tool
... https://omictools.com/snp-prioritization-category ...
written 2 days ago by zx87544.7k
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Comment: C: Expression using greek letters in R
... OK, still wondering how did you end up with that string. ...
written 4 days ago by zx87544.7k
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Comment: C: Expression using greek letters in R
... Probably would be better if you could share example GRanges object, and expected output. ...
written 4 days ago by zx87544.7k
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Comment: C: Expression using greek letters in R
... How did you come up with that string, where is it from? ...
written 4 days ago by zx87544.7k
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Answer: A: Expression using greek letters in R
... I don't have the full answer, but below should get you started: library(stringr) x <- "myrangammadomsequenmuce15874withsomephigreek2874lettergamma" greek <- "gamma|mu|phi" str_split(x, greek) # [[1]] # [1] "myran" "domsequen" "ce15874withsome" ...
written 4 days ago by zx87544.7k
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Comment: C: error reading GSE using getGEO()
... You might get better response at: https://support.bioconductor.org/ ...
written 5 days ago by zx87544.7k
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Comment: C: Cochran-Armitage test in R
... [here] link is broken. ...
written 5 days ago by zx87544.7k
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Comment: C: How to solve error memory R package pedigree
... How big is your `A` ? Do you have enough RAM? See related post: https://stackoverflow.com/questions/33581617/large-sparse-matrix-to-matrix-r ...
written 5 days ago by zx87544.7k
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Answer: C: Run Windows CMD commands from R-studio
... For Windows try using `shell`: shell("copy test1.txt test1_mycopy.txt") But I agree with @h.mon, and would prefer to use `file.copy`. ...
written 5 days ago by zx87544.7k
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Answer: C: GWAS analysis tool
... Read about [plink][1] and search for "plink tutorial GWAS". Also, related biostars post: https://www.biostars.org/p/45440/ https://www.biostars.org/p/249149/ There are many R packages, too: https://www.ncbi.nlm.nih.gov/pubmed/28132152 https://bioconductor.org/packages/release/bioc/html/GWAST ...
written 5 days ago by zx87544.7k

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