User: david.tieri

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Posts by david.tieri

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TCGAbiolinks Enrichment analysis
... Hi, I am trying to follow the TCGAbiolinks Vignette in the "Analyze the data" section about differential expression and enrichment analysis, but I am running into a problem. When I load the dataset dataBRCA which is included in the TCGAbiolinks library, the enrichment analysis from the vignette wor ...
tcgabiolinks rna-seq written 3.0 years ago by david.tieri0
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Comment: C: Enrichment analysis on TCGA data
... Hi EagleEye, Thank you very much for your response. That seems to be what I am trying to do, however I would like to keep my analysis in R. Is there a tool that works in R that does a similar task? Thank you, David ...
written 3.0 years ago by david.tieri0
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Enrichment analysis on TCGA data
... Hi, I have a list of differentially expressed genes between tumor and normal samples determined from TCGA data (BRCA). I am trying to cluster the genes into related groups and determine gene annotations for each cluster. The clustering is no problem, but annotating the clusters is proving to be dif ...
tcgabiolinks rna-seq written 3.0 years ago by david.tieri0 • updated 2.6 years ago by Biostar ♦♦ 20

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