User: anicet.ebou
anicet.ebou • 130
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Posts by anicet.ebou
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... With a one-line bash script:
`awk -v RS= '{print > ("output-" NR ".txt")}' file_name`
...
written 4 months ago by
anicet.ebou • 130
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... Do you think doing an analysis of variance ? or a multivariate analysis ? ...
written 6 months ago by
anicet.ebou • 130
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... Hello @anais1386, can you run `systemInfo()` in your R terminal and paste the output to help us understand the issue ? Thanks you in advance. ...
written 8 months ago by
anicet.ebou • 130
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...
Another method:
1. Use option `-outfmt 5` in BLAST+ suite command line. This will give you a xml file as output.
2. Use this little python script to parse rapidly data.
import re
output = open('file.out','w')
n = 0
print >> output, 'protein'+'\t'+'h ...
written 9 months ago by
anicet.ebou • 130
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... Fix the issue by changing https by http. Thanks everybody. ...
written 9 months ago by
anicet.ebou • 130
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7 follow
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... The objective of bioSyntax is to bring you closer to your data, giving you an intuitive & empathetic understanding of biology.
bioSyntax integrates seamlessly with vim, less, gedit, & sublime to automatically recognize your favorite biological file formats.
For more informations please visi ...
written 9 months ago by
anicet.ebou • 130
• updated
6 months ago by
ababaian • 20
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... Please include sample data and What do you expect the result to be and what was you result when you launch your analysis?
With that answer we can improve your analysis. ...
written 10 months ago by
anicet.ebou • 130
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... If i clearly understand your question you want to use the LIMMA package to perform ANOVA in your microarray analysis? ...
written 10 months ago by
anicet.ebou • 130
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... 1. Firstly you should learn [Python][1], [Perl][2], [Bioperl][3] and [Biopython][4] and [R/Bioconductor][7].
2. Bioinformaticians don't like to work on windows even if you install Cygwin. So you absolutely need a linux distros and i strongly recommend [Ubuntu][5] because of the community. So when a ...
written 10 months ago by
anicet.ebou • 130
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... Ubuntu.
Because of the community and all the ressources available it will be more easy for your student to get in touch.
When i was on my first project (Transcriptomics to predict toxins peptide-like components in venom gland of a spider), the community help me a lot to master in few days basics ...
written 10 months ago by
anicet.ebou • 130
Latest awards to anicet.ebou
Popular Question
8 months ago,
created a question with more than 1,000 views.
For Script to run blast locally with multiple files in a directory as queries
Appreciated
9 months ago,
created a post with more than 5 votes.
For Announcing bioSyntax: Syntax highlighting for biological files
Teacher
10 months ago,
created an answer with at least 3 up-votes.
For A: Recommendations of Linux distros for beginners in bioinformatics
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