User: Kevin Ernst

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Posts by Kevin Ernst

<prev • 4 results • page 1 of 1 • next >
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Answer: A: CWL: Linker error doing 'pip install cwlref-runner' on CentOS 6 system
... It's entirely possible this situation arose in my case because I export `CFLAGS` and `LDFLAGS`, which contain another (older) Python's include and library files. But if anyone finds themselves in this situation on CentOS 6, there *is* a relatively painless solution which just involves updating pip ...
written 2.6 years ago by Kevin Ernst0
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CWL: Linker error doing 'pip install cwlref-runner' on CentOS 6 system
... I get the following linker error trying to `pip install cwel-runner` on a CentOS 6 system, within a virtualenv using `python27-python` from the "centos-sclo-rh" repository: ``` $ virtualenv venv $ source venv/bin/activate (venv)$ pip install cwlref-runner # >>> the usual 'pip' chatter, fol ...
common workflow language centos cwl centos6 pip written 2.6 years ago by Kevin Ernst0
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Answer: A: Docker error "Mounts denied" running example workflows from CWL User Guide on Ma
... This is an issue of the Docker daemon not having appropriate permissions to the host filesystem. [Bind mounds and filesystem sharing](https://docs.docker.com/docker-for-mac/osxfs/) have changed quite a bit with the new (native) Docker for Mac, as compared to the old Boot2Docker and Docker Toolbox. D ...
written 2.6 years ago by Kevin Ernst0
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Docker error "Mounts denied" running example workflows from CWL User Guide on Mac OS X
... On Mac OS X 10.11 (El Capitan) with Docker CE 17.03 installed, I get the following error when attempting to run the workflow from Section 2.6 ("[Running tools inside Docker](http://www.commonwl.org/v1.0/UserGuide.html#Running_tools_inside_Docker)") of the [CWL User Guide](http://www.commonwl.org/v1. ...
mac os x common workflow language cwl docker macos written 2.6 years ago by Kevin Ernst0

Latest awards to Kevin Ernst

Popular Question 2.6 years ago, created a question with more than 1,000 views. For CWL: Linker error doing 'pip install cwlref-runner' on CentOS 6 system
Scholar 2.6 years ago, created an answer that has been accepted. For A: CWL: Linker error doing 'pip install cwlref-runner' on CentOS 6 system
Scholar 2.6 years ago, created an answer that has been accepted. For A: Docker error "Mounts denied" running example workflows from CWL User Guide on Ma

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