User: wamiqsaifi

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wamiqsaifi0
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Taking surrogate variable into account before running PCA
... I ran SVA to get surrogate variables. I want to visualise my data taking into consideration the surrogate variables. I came to know tha modifying the original expression matrix is not a good idea (https://www.biostars.org/p/121489/). How can I go about doing this? ...
batch effect svaseq sva written 2.3 years ago by wamiqsaifi0 • updated 2.2 years ago by ivivek_ngs4.8k

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