User: wamiqsaifi

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wamiqsaifi0
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Posts by wamiqsaifi

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Taking surrogate variable into account before running PCA
... I ran SVA to get surrogate variables. I want to visualise my data taking into consideration the surrogate variables. I came to know tha modifying the original expression matrix is not a good idea (https://www.biostars.org/p/121489/). How can I go about doing this? ...
batch effect svaseq sva written 21 months ago by wamiqsaifi0 • updated 20 months ago by ivivek_ngs4.7k

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