User: eidriangm

gravatar for eidriangm
eidriangm0
Reputation:
0
Status:
New User
Last seen:
6 months ago
Joined:
1 year, 8 months ago
Email:
e********@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by eidriangm

<prev • 4 results • page 1 of 1 • next >
0
votes
1
answer
2.3k
views
1
answers
Comment: C: Patch for GEOquery package error: getGEO Error in download.file, cannot open des
... **packageVersion("GEOquery") must be >= 2.48 and maybe you have 2.40.** As it was happening to me: Probably you are just "updating" GEOquery by only calling biocLite: - source("https://bioconductor.org/biocLite.R") - biocLite("GEOquery")* However be sure that you have the latest **Biocond ...
written 7 months ago by eidriangm0
0
votes
0
answers
326
views
0
answers
Comment: C: How to obtain the chromosome out of an accession number?
... Well that is already given in the the question, with the Entrez ID gene 3806, which is annotated in the accession NT_113949 and I want to obtain the chromosome which is number 19. I could look for more examples but the idea is basically that, from an accession number prefixed with NT_ NW_ obtain its ...
written 10 months ago by eidriangm0
0
votes
0
answers
326
views
0
answers
Comment: C: How to obtain the chromosome out of an accession number?
... I saw it but all the links provided there are not working and the answer with awk + sed only applies with NC_ (already under control). Thanks anyway ...
written 10 months ago by eidriangm0
0
votes
0
answers
326
views
0
answers
How to obtain the chromosome out of an accession number?
... Hello Community. My problem is the following, I have some bed files whose genomic regions are annotated using the chromosome (chr__ start end ... ...), and I want to use the [ncbi gff3][1] to extract the info but this file is annotated using accession.version numbers. Bedtools oblige me to use ...
genome ncbi chromosome refseq accession written 10 months ago by eidriangm0

Latest awards to eidriangm

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2223 users visited in the last hour