User: krc3004

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krc30040
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Posts by krc3004

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Converting TCGA/GDC IDs
... Hi all, I'm using GDC to bulk download RNA-seq data from TCGA. I'm able to download data just fine, but the filenames are the UUIDs, as shown below: https://portal.gdc.cancer.gov/files/c85a6f34-7b6b-4677-beac-44f06bcc5c32 What I really want are the Entity IDs, also in the above link. Is there a ...
tcga gdc rna-seq written 7 days ago by krc30040
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How to Interpret COSMIC/HGVS Gene Fusion Format
... Hi all, I'm trying to analyze gene fusion data from COSMIC and am having difficulty interpreting the HGVS format/documentation. Here is documentation from COSMIC: http://cancer.sanger.ac.uk/cosmic/help/fusion/summary and here is documentation from HGVS: http://www.hgvs.org/mutnomen/recs-RNA.h ...
hgvs cosmic fusion translocation written 8 weeks ago by krc30040

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