User: apulunuj

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apulunuj0
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Posts by apulunuj

<prev • 23 results • page 1 of 3 • next >
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Comment: C: Unable to install mclust package in rstudio
... Noted thank you. I will take it down. ...
written 7 weeks ago by apulunuj0
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(Closed) Unable to install mclust package in rstudio
... I am having an issue when installing the "mclust" package on rstudio. I appreciate any and all help with resolving the issue. Here is the warning message:`I am having an issue when installing the "mclust" package on rstudio. Here is the warning message: '>install.packages("mclust") trying URL ...
R linux written 7 weeks ago by apulunuj0
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Programs to calculate clade age
... I currently trying to generate a species tree for a dataset I have. I wanted to ask if anyone knows good programs that calculate the clade age with a species tree. It's my first as well generating such a tree as well. Any pointers are welcome as well. ...
phylogenetics written 7 weeks ago by apulunuj0 • updated 7 weeks ago by Kevin Blighe13k
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Comment: C: Global symbol requires explicit package name issue
... I have resolved the matter, after investigating the perl script above. I saw that the variable $temp_seqid is necessarily defined outside the block. So it was removed and the script works well again. A fix was pushed to github as well. ...
written 7 weeks ago by apulunuj0
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Comment: C: Global symbol requires explicit package name issue
... Yes I did after organizing my directories, I ran it with the dataset and it worked. And I know my input files are the right ones as well. And I don't see any differences with the format of my input files against the example dataset. ...
written 8 weeks ago by apulunuj0
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Comment: C: Global symbol requires explicit package name issue
... I tried both cases, I'm now getting another error uninitialized hash element "sseqid" ...
written 8 weeks ago by apulunuj0
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Comment: C: Global symbol requires explicit package name issue
... Thank you @genomax I still not too sure how to enter code properly on biostar. Any pointers? Is it in markdown as well? ...
written 8 weeks ago by apulunuj0
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Global symbol requires explicit package name issue
... I have really little background on perl. Currently, I am trying to make use of the FASTKs pipeline by mrckrain on github. The pipeline works primarily through a bash script called run_kspipeline.sh file. The bash script makes use of a perl script. When I run the perl script I get the global symbol ...
perl fasktks written 8 weeks ago by apulunuj0 • updated 8 weeks ago by GenoMax42k
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Comment: C: Use of uninitialized value error in Perl Script
... Thank you I fixed it now, it was the blast format. ...
written 4 months ago by apulunuj0
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Use of uninitialized value error in Perl Script
... I am making use of a perl script for a pipeline and I'm getting the following error message. I don't know what to do. The error message I'm getting is: Use of uninitialized value $qulen in division (/) at FAST_kspipe.pl line 167, <$blast_file> line 7. Illegal division by zero at FAST_kspipe. ...
perl written 4 months ago by apulunuj0 • updated 4 months ago by Ram13k

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