User: mckf11111

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mckf1111120
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Posts by mckf11111

<prev • 26 results • page 1 of 3 • next >
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Comment: C: High Speed Downloading of SRA, SAM and Fastq Files
... I would try it, thx! ...
written 28 days ago by mckf1111120
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Tutorial: High Speed Downloading of SRA, SAM and Fastq Files
... > This is a brief tutorial about methods of downloading sra, sam and fastq files, mainly focusing on Aspera Connect. ## NCBI-SRA and EBI-ENA databases [SRA: Sequence Read Archive](https://www.ncbi.nlm.nih.gov/sra): It belongs to NCBI (National Center for Biotechnology Information), is a databas ...
sra fastq aspera connect sam tutorial written 29 days ago by mckf1111120
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Comment: A: Fundamental Analysis of TCGA RNA-seq Data-02
... Sorry to separate the posts! I have made the post compilation here: [Post Series: Fundamental Analysis of TCGA RNA-seq Data](https://www.biostars.org/p/290217/) ...
written 4 weeks ago by mckf1111120
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Comment: A: Fundamental Analysis of TCGA RNA-seq Data-01
... Sorry to separate the posts! I have made the post compilation here: [Post Series: Fundamental Analysis of TCGA RNA-seq Data](https://www.biostars.org/p/290217/) ...
written 4 weeks ago by mckf1111120
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Blog: Post Series: Fundamental Analysis of TCGA RNA-seq Data
... > Hi, this is my first post series, I would like to share my learning experience with you and also document some useful notes for reminder. > **Welcome to my blog: [bioinfostar](http://bioinfostar.com)** **[Fundamental Analysis of TCGA RNA-seq Data-01](http://bioinfostar.com/2017/12/17/Battl ...
R tcga blog rna-seq written 4 weeks ago by mckf1111120
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Comment: C: Fundamental Analysis of TCGA RNA-seq Data-02
... Sorry, I cant follow you... ...
written 4 weeks ago by mckf1111120
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Comment: C: Fundamental Analysis of TCGA RNA-seq Data-02
... OK, that would be better. ...
written 5 weeks ago by mckf1111120
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Blog: (Closed) Fundamental Analysis of TCGA RNA-seq Data-02
... > This is the second part of the overall analysis pipeline, mainly documenting how to download and process data. ## Data Selection I would like to compare the gene differential expression (DE) between tumor and tumor_matched_normal (TN) samples For speeding up the analysis, firstly I chose **A ...
R tcga blog rna-seq written 5 weeks ago by mckf1111120
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Blog: (Closed) Fundamental Analysis of TCGA RNA-seq Data-01
... > This is the first part of the overall analysis pipeline, mainly documenting introductions of important resources and the data downloading methods. ## Resources * [TCGA (The Cancer Genome Atlas)](https://cancergenome.nih.gov/):**Human** cancer database, on one hand, there is a huge number of m ...
R tcga blog rna-seq written 5 weeks ago by mckf1111120
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Comment: C: How does cBioPortal normalize data
... Actually I read, but I may need to dig deeper than I thought~~ ...
written 7 weeks ago by mckf1111120

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Supporter 29 days ago, voted at least 25 times.

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