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Posts by MGlenn
... Thanks for getting back to me Leandro, I appreciate it. I should have mentioned that I also ran the kissplice2reftranscriptome step as well and obtained the mainOutput.tsv file of SNPs that were called between all combinations of cond1, rep1, rep2, cond2, rep1, rep2 etc. So, it is possible to fil ...
... Hello, I am thinking about using the KisSplice workflow to call SNPs between 2 closely related species. I have a Trinity assembly, and a transdecoder ORF file. I have 4 paired-end samples total for 2 species - 2 samples per species. I would like to call SNPs between species 1 and species 2, to h ...
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