User: MGlenn

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MGlenn0
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Posts by MGlenn

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Answer: A: Calling de novo SNPs between two species with KisSplice
... Thanks for getting back to me Leandro, I appreciate it. I should have mentioned that I also ran the kissplice2reftranscriptome step as well and obtained the mainOutput.tsv file of SNPs that were called between all combinations of cond1, rep1, rep2, cond2, rep1, rep2 etc. So, it is possible to fil ...
written 4 days ago by MGlenn0
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Calling de novo SNPs between two species with KisSplice
... Hello, I am thinking about using the KisSplice workflow to call SNPs between 2 closely related species. I have a Trinity assembly, and a transdecoder ORF file. I have 4 paired-end samples total for 2 species - 2 samples per species. I would like to call SNPs between species 1 and species 2, to h ...
kisssplice2reftranscriptome snp kissplice written 10 days ago by MGlenn0 • updated 1 day ago by vincent.lacroix50

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