User: Dayna

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Dayna20
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1 month, 1 week ago
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9 months, 1 week ago
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Posts by Dayna

<prev • 35 results • page 1 of 4 • next >
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Comment: C: How to interpet the biological coefficient of variation figure?
... I did before posting the question, but can't map to the figure I have. ...
written 6 weeks ago by Dayna20
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How to interpet the biological coefficient of variation figure?
... Hi everyone I followed some tutorials for my first RNAseq analysis. I generate the biologcal coefficient of variation figure and can't interpet it, if any one can give me any idea ? we have normal versus patients thanks ...
rna-seq written 6 weeks ago by Dayna20
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Comment: C: why a stop-loss is pathogenic
... Why a stoploss mutation is not related to bioinformatics? Shouldnot we understand the type of mutations we try to discover from data? ...
written 12 weeks ago by Dayna20
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(Closed) why a stop-loss is pathogenic
... Hi every one Could anyone explain why a stop-loss is pathogenic? Like why causing an elongated protein is pathogenic? ...
snp written 12 weeks ago by Dayna20
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Comment: C: put a vcf in a library
... so library means just a folder? then i share the folder over ftp, and nothing to do with a vcf? ...
written 3 months ago by Dayna20
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Comment: C: put a vcf in a library
... me neither. I am asked to put my vcf in a library to be shared via ftp server? ...
written 3 months ago by Dayna20
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Comment: C: What are the range or ceiling of metrics like DP4 , MQP, etc to filter variant
... that's really helpful Kevin, thank you a lot ...
written 4 months ago by Dayna20
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Comment: C: What are the range or ceiling of metrics like DP4 , MQP, etc to filter variant
... Thanks Kevin a lot . But this seems fuzzy logic to me as a beginner, when I look at a number, and I can't even judge to discard or keep as no rule ...
written 4 months ago by Dayna20
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Comment: C: What are the range or ceiling of metrics like DP4 , MQP, etc to filter variant
... Some values doesn't exist because this is not gatk pipeline, this samtools and bcftools, like dp4 ..etc. Yes, I understand gatk is better but as a start and for benchmarking, i need to start with samtools. ...
written 4 months ago by Dayna20
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What are the range or ceiling of metrics like DP4 , MQP, etc to filter variants?
... Hi Do you know what are the range of the following metrics? When it says bigger is better, I don't know the ceiling to decide, like if the maximum possible value is 1 then 0.9 is big, and if the maximum is 10 or 50 then 0.9 is low. **I am sorry, I am a very beginner.** ##INFO= ##INF ...
variant calling written 4 months ago by Dayna20 • updated 4 months ago by Kevin Blighe26k

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Supporter 7 months ago, voted at least 25 times.

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