User: bsharmi6

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bsharmi610
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Posts by bsharmi6

<prev • 4 results • page 1 of 1 • next >
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Comment: C: Homer log odds score calculation
... Hey did you figure it out? ...
written 8 months ago by bsharmi610
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HOMER findMotifsGenome.pl to get the location of the motifs
... Hello, I need to find the location of known motifs from ChIP-seq data. I used HOMER findMotifsGenome.pl but I have a question on calculating the exact location. The output file from HOMER contains the columns: Peak/Region ID Offset from the center of the region Sequence of the site Name of the Moti ...
chip-seq written 9 months ago by bsharmi610
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HOMER find motifs for each sequence
... Hello, I am running HOMER to find known motif enrichment on differentially methylated regions (DMR). The target consists of fasta sequences corresponding to DMR and I have also provided a background file. I can run the commands fine. But I was wondering if I can get the intermediate output from H ...
sequence written 12 months ago by bsharmi610
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Comment: A: HOMER target sequence location
... I also have the same problem. Did you figure it out? Thank you, Sharmi ...
written 12 months ago by bsharmi610

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