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User: jaqx008

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jaqx008 • 40
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40
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1 week ago
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11 months, 2 weeks ago
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Posts by jaqx008

<prev • 201 results • page 1 of 21 • next >
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Comment: C: How do I find adaptors for my miRNA seq data?
... I think I understand now and my fastq file seem to already trimmed. Thanks for your suggestions ...
written 7 days ago by jaqx008 • 40
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Comment: C: How do I find adaptors for my miRNA seq data?
... Does it make sense now? sorry for unclear title ...
written 7 days ago by jaqx008 • 40
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Comment: C: How is miRNA seq date made with ion Torrent cleaned?
... https://www.ncbi.nlm.nih.gov/sra/SRX2245299[accn] ...
written 7 days ago by jaqx008 • 40
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How do I find adaptors for my miRNA seq data?
... Hello everyone, I downloaded a miRNA-seq data from NCBI and I want to clip the adaptor sequences, but the adaptor sequence used was not included in the experimental description. How do I find the adaptor sequence to usse for clipping the fastq data? the link to the page is https://www.ncbi.nlm.nih.g ...
ion torrent mirna-seq written 7 days ago by jaqx008 • 40
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Comment: C: Recommendation on RNA-seq data for wild (untreated) Zebrafish developmental stag
... I came across this before but wasnt able to figure out what was what. Thanks for pointing out that the names are in the supplementary material1. Thanks ...
written 8 days ago by jaqx008 • 40
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Recommendation on RNA-seq data for wild (untreated) Zebrafish developmental stages needed?
... Hello Everyone. I am looking for recommendations on were I can download good RNA-seq data for the developmental stages of the model organism, *Danio rerio*. I know this is available but my searches havent been able to yield what I am looking for. NCBI has a tone of sra for zebrafish but atleast all ...
danio rerio zebrafish mapping rna-seq sequencing written 10 days ago by jaqx008 • 40
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Comment: C: How do I resolve this error when using tblastn -db?
... I did upvoted it. ...
written 10 days ago by jaqx008 • 40
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Comment: C: How do I resolve this error when using tblastn -db?
... You were right. I copied the content into a new text file and got something out. thanks for your sugestion ...
written 10 days ago by jaqx008 • 40
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Comment: C: How do I resolve this error when using tblastn -db?
... the content of the text file looks like this. I believe its a fasta >Cel-Ego1 MGDEGYRGWIKLEIPCSLPERQMGPIVKCHVAKLEPALNEYNIKVLTKGQVQVVEEQDCEPFYETNYEVATSRFSHDLIA AIQTYLKDLSTDHLMPFQRGNLVLHSSDFWSSELTCHLVDIPLAAVFFGNIQGGTFINHWEVSFWDDVRRRKSARTRNTE PTQADKIGMNQIKVEFEFDKIDFM ...
written 10 days ago by jaqx008 • 40
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Comment: C: How do I resolve this error when using tblastn -db?
... file protein.txt gave protein.txt: data head protein.txt gave a binary looking file as outbut (just jagons inside I guess) ...
written 10 days ago by jaqx008 • 40

Latest awards to jaqx008

Popular Question 9 weeks ago, created a question with more than 1,000 views. For python script error: ImportError: No module named pysam
Scholar 4 months ago, created an answer that has been accepted. For A: GREP: out of memory
Centurion 6 months ago, created 100 posts.
Rising Star 8 months ago, created 50 posts within first three months of joining.
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