User: hmnipunad

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hmnipunad0
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Posts by hmnipunad

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Answer: A: How to score a multiple sequence alignment (MSA)?
... I got an error as 'Warning: reference alignment BB20001.msf has no aligned (upper-case) columns' when running ./qscore to compare test and reference sequence files './qscore -test BB20001.msf -ref BB20001_out.msf'. Could anyone help me to solve this? ...
written 4 days ago by hmnipunad0
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Errors of qscore installation
... I tried to install qscore method(https://www.drive5.com/qscore/) to score multiple sequence alignment against its reference ailgnment from Balibase. But I got an error as below when I ran 'make' command. g++ -O3 -g -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -W -c comparepair.cpp In file included fro ...
scoring msa cp score msa score qscore msa written 4 days ago by hmnipunad0 • updated 3 days ago by genomax39k
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Comment: C: How to score a multiple sequence alignment (MSA)?
... I tried to install qscore by running the 'make' command. But I got an error as below, g++ -O3 -g -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -W -c comparepair.cpp In file included from /usr/include/c++/4.9/ext/hash_map:60:0, from qscore.h:21, from comparepair.cpp:1: /us ...
written 4 days ago by hmnipunad0

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