User: timo.metz

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timo.metz0
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Posts by timo.metz

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assessment of error corrected pacbio reads
... Hey there, I used LoRDEC to correct my PacBio reads and would now like to see if the error correction actually worked. There is an error correction tool coming with LoRDEC [http://www.lirmm.fr/~rivals/lordec/FAQ/#orgheadline45] but it does not work for me, I always encounter the same error: ValueEr ...
pacb pacbio lordec error-correction written 2.5 years ago by timo.metz0
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LTR-Harvest false positives (Maker repeat library construction)
... Hey there, currently I want to to a genome annotation using maker. For the repeats I followed the following protocol: http://weatherby.genetics.utah.edu/MAKER/wiki/index.php/Repeat_Library_Construction-Advanced In there they use LTR-Harvest to find LTRs and then want to remove false positives. Fo ...
annotation ltr-harvest maker written 2.6 years ago by timo.metz0 • updated 14 months ago by vflorelo0

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